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Vesiclepedia: A Compendium for Extracellular Vesicles with Continuous Community Annotation
Extracellular vesicles (EVs) are membraneous vesicles released by a variety of cells into their microenvironment. Recent studies have elucidated the role of EVs in intercellular communication, pathogenesis, drug, vaccine and gene-vector delivery, and as possible reservoirs of biomarkers. These findi...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3525526/ https://www.ncbi.nlm.nih.gov/pubmed/23271954 http://dx.doi.org/10.1371/journal.pbio.1001450 |
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author | Kalra, Hina Simpson, Richard J. Ji, Hong Aikawa, Elena Altevogt, Peter Askenase, Philip Bond, Vincent C. Borràs, Francesc E. Breakefield, Xandra Budnik, Vivian Buzas, Edit Camussi, Giovanni Clayton, Aled Cocucci, Emanuele Falcon-Perez, Juan M. Gabrielsson, Susanne Gho, Yong Song Gupta, Dwijendra Harsha, H. C. Hendrix, An Hill, Andrew F. Inal, Jameel M. Jenster, Guido Krämer-Albers, Eva-Maria Lim, Sai Kiang Llorente, Alicia Lötvall, Jan Marcilla, Antonio Mincheva-Nilsson, Lucia Nazarenko, Irina Nieuwland, Rienk Nolte-'t Hoen, Esther N. M. Pandey, Akhilesh Patel, Tushar Piper, Melissa G. Pluchino, Stefano Prasad, T. S. Keshava Rajendran, Lawrence Raposo, Graca Record, Michel Reid, Gavin E. Sánchez-Madrid, Francisco Schiffelers, Raymond M. Siljander, Pia Stensballe, Allan Stoorvogel, Willem Taylor, Douglas Thery, Clotilde Valadi, Hadi van Balkom, Bas W. M. Vázquez, Jesús Vidal, Michel Wauben, Marca H. M. Yáñez-Mó, María Zoeller, Margot Mathivanan, Suresh |
author_facet | Kalra, Hina Simpson, Richard J. Ji, Hong Aikawa, Elena Altevogt, Peter Askenase, Philip Bond, Vincent C. Borràs, Francesc E. Breakefield, Xandra Budnik, Vivian Buzas, Edit Camussi, Giovanni Clayton, Aled Cocucci, Emanuele Falcon-Perez, Juan M. Gabrielsson, Susanne Gho, Yong Song Gupta, Dwijendra Harsha, H. C. Hendrix, An Hill, Andrew F. Inal, Jameel M. Jenster, Guido Krämer-Albers, Eva-Maria Lim, Sai Kiang Llorente, Alicia Lötvall, Jan Marcilla, Antonio Mincheva-Nilsson, Lucia Nazarenko, Irina Nieuwland, Rienk Nolte-'t Hoen, Esther N. M. Pandey, Akhilesh Patel, Tushar Piper, Melissa G. Pluchino, Stefano Prasad, T. S. Keshava Rajendran, Lawrence Raposo, Graca Record, Michel Reid, Gavin E. Sánchez-Madrid, Francisco Schiffelers, Raymond M. Siljander, Pia Stensballe, Allan Stoorvogel, Willem Taylor, Douglas Thery, Clotilde Valadi, Hadi van Balkom, Bas W. M. Vázquez, Jesús Vidal, Michel Wauben, Marca H. M. Yáñez-Mó, María Zoeller, Margot Mathivanan, Suresh |
author_sort | Kalra, Hina |
collection | PubMed |
description | Extracellular vesicles (EVs) are membraneous vesicles released by a variety of cells into their microenvironment. Recent studies have elucidated the role of EVs in intercellular communication, pathogenesis, drug, vaccine and gene-vector delivery, and as possible reservoirs of biomarkers. These findings have generated immense interest, along with an exponential increase in molecular data pertaining to EVs. Here, we describe Vesiclepedia, a manually curated compendium of molecular data (lipid, RNA, and protein) identified in different classes of EVs from more than 300 independent studies published over the past several years. Even though databases are indispensable resources for the scientific community, recent studies have shown that more than 50% of the databases are not regularly updated. In addition, more than 20% of the database links are inactive. To prevent such database and link decay, we have initiated a continuous community annotation project with the active involvement of EV researchers. The EV research community can set a gold standard in data sharing with Vesiclepedia, which could evolve as a primary resource for the field. |
format | Online Article Text |
id | pubmed-3525526 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-35255262012-12-27 Vesiclepedia: A Compendium for Extracellular Vesicles with Continuous Community Annotation Kalra, Hina Simpson, Richard J. Ji, Hong Aikawa, Elena Altevogt, Peter Askenase, Philip Bond, Vincent C. Borràs, Francesc E. Breakefield, Xandra Budnik, Vivian Buzas, Edit Camussi, Giovanni Clayton, Aled Cocucci, Emanuele Falcon-Perez, Juan M. Gabrielsson, Susanne Gho, Yong Song Gupta, Dwijendra Harsha, H. C. Hendrix, An Hill, Andrew F. Inal, Jameel M. Jenster, Guido Krämer-Albers, Eva-Maria Lim, Sai Kiang Llorente, Alicia Lötvall, Jan Marcilla, Antonio Mincheva-Nilsson, Lucia Nazarenko, Irina Nieuwland, Rienk Nolte-'t Hoen, Esther N. M. Pandey, Akhilesh Patel, Tushar Piper, Melissa G. Pluchino, Stefano Prasad, T. S. Keshava Rajendran, Lawrence Raposo, Graca Record, Michel Reid, Gavin E. Sánchez-Madrid, Francisco Schiffelers, Raymond M. Siljander, Pia Stensballe, Allan Stoorvogel, Willem Taylor, Douglas Thery, Clotilde Valadi, Hadi van Balkom, Bas W. M. Vázquez, Jesús Vidal, Michel Wauben, Marca H. M. Yáñez-Mó, María Zoeller, Margot Mathivanan, Suresh PLoS Biol Community Page Extracellular vesicles (EVs) are membraneous vesicles released by a variety of cells into their microenvironment. Recent studies have elucidated the role of EVs in intercellular communication, pathogenesis, drug, vaccine and gene-vector delivery, and as possible reservoirs of biomarkers. These findings have generated immense interest, along with an exponential increase in molecular data pertaining to EVs. Here, we describe Vesiclepedia, a manually curated compendium of molecular data (lipid, RNA, and protein) identified in different classes of EVs from more than 300 independent studies published over the past several years. Even though databases are indispensable resources for the scientific community, recent studies have shown that more than 50% of the databases are not regularly updated. In addition, more than 20% of the database links are inactive. To prevent such database and link decay, we have initiated a continuous community annotation project with the active involvement of EV researchers. The EV research community can set a gold standard in data sharing with Vesiclepedia, which could evolve as a primary resource for the field. Public Library of Science 2012-12-18 /pmc/articles/PMC3525526/ /pubmed/23271954 http://dx.doi.org/10.1371/journal.pbio.1001450 Text en © 2012 Kalra et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Community Page Kalra, Hina Simpson, Richard J. Ji, Hong Aikawa, Elena Altevogt, Peter Askenase, Philip Bond, Vincent C. Borràs, Francesc E. Breakefield, Xandra Budnik, Vivian Buzas, Edit Camussi, Giovanni Clayton, Aled Cocucci, Emanuele Falcon-Perez, Juan M. Gabrielsson, Susanne Gho, Yong Song Gupta, Dwijendra Harsha, H. C. Hendrix, An Hill, Andrew F. Inal, Jameel M. Jenster, Guido Krämer-Albers, Eva-Maria Lim, Sai Kiang Llorente, Alicia Lötvall, Jan Marcilla, Antonio Mincheva-Nilsson, Lucia Nazarenko, Irina Nieuwland, Rienk Nolte-'t Hoen, Esther N. M. Pandey, Akhilesh Patel, Tushar Piper, Melissa G. Pluchino, Stefano Prasad, T. S. Keshava Rajendran, Lawrence Raposo, Graca Record, Michel Reid, Gavin E. Sánchez-Madrid, Francisco Schiffelers, Raymond M. Siljander, Pia Stensballe, Allan Stoorvogel, Willem Taylor, Douglas Thery, Clotilde Valadi, Hadi van Balkom, Bas W. M. Vázquez, Jesús Vidal, Michel Wauben, Marca H. M. Yáñez-Mó, María Zoeller, Margot Mathivanan, Suresh Vesiclepedia: A Compendium for Extracellular Vesicles with Continuous Community Annotation |
title | Vesiclepedia: A Compendium for Extracellular Vesicles with Continuous Community Annotation |
title_full | Vesiclepedia: A Compendium for Extracellular Vesicles with Continuous Community Annotation |
title_fullStr | Vesiclepedia: A Compendium for Extracellular Vesicles with Continuous Community Annotation |
title_full_unstemmed | Vesiclepedia: A Compendium for Extracellular Vesicles with Continuous Community Annotation |
title_short | Vesiclepedia: A Compendium for Extracellular Vesicles with Continuous Community Annotation |
title_sort | vesiclepedia: a compendium for extracellular vesicles with continuous community annotation |
topic | Community Page |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3525526/ https://www.ncbi.nlm.nih.gov/pubmed/23271954 http://dx.doi.org/10.1371/journal.pbio.1001450 |
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