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A Genome-Wide Association Study Identifies GRK5 and RASGRP1 as Type 2 Diabetes Loci in Chinese Hans

Substantial progress has been made in identification of type 2 diabetes (T2D) risk loci in the past few years, but our understanding of the genetic basis of T2D in ethnically diverse populations remains limited. We performed a genome-wide association study and a replication study in Chinese Hans com...

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Autores principales: Li, Huaixing, Gan, Wei, Lu, Ling, Dong, Xiao, Han, Xueyao, Hu, Cheng, Yang, Zhen, Sun, Liang, Bao, Wei, Li, Pengtao, He, Meian, Sun, Liangdan, Wang, Yiqin, Zhu, Jingwen, Ning, Qianqian, Tang, Yong, Zhang, Rong, Wen, Jie, Wang, Di, Zhu, Xilin, Guo, Kunquan, Zuo, Xianbo, Guo, Xiaohui, Yang, Handong, Zhou, Xianghai, Zhang, Xuejun, Qi, Lu, Loos, Ruth J.F., Hu, Frank B., Wu, Tangchun, Liu, Ying, Liu, Liegang, Yang, Ze, Hu, Renming, Jia, Weiping, Ji, Linong, Li, Yixue, Lin, Xu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Diabetes Association 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3526061/
https://www.ncbi.nlm.nih.gov/pubmed/22961080
http://dx.doi.org/10.2337/db12-0454
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author Li, Huaixing
Gan, Wei
Lu, Ling
Dong, Xiao
Han, Xueyao
Hu, Cheng
Yang, Zhen
Sun, Liang
Bao, Wei
Li, Pengtao
He, Meian
Sun, Liangdan
Wang, Yiqin
Zhu, Jingwen
Ning, Qianqian
Tang, Yong
Zhang, Rong
Wen, Jie
Wang, Di
Zhu, Xilin
Guo, Kunquan
Zuo, Xianbo
Guo, Xiaohui
Yang, Handong
Zhou, Xianghai
Zhang, Xuejun
Qi, Lu
Loos, Ruth J.F.
Hu, Frank B.
Wu, Tangchun
Liu, Ying
Liu, Liegang
Yang, Ze
Hu, Renming
Jia, Weiping
Ji, Linong
Li, Yixue
Lin, Xu
author_facet Li, Huaixing
Gan, Wei
Lu, Ling
Dong, Xiao
Han, Xueyao
Hu, Cheng
Yang, Zhen
Sun, Liang
Bao, Wei
Li, Pengtao
He, Meian
Sun, Liangdan
Wang, Yiqin
Zhu, Jingwen
Ning, Qianqian
Tang, Yong
Zhang, Rong
Wen, Jie
Wang, Di
Zhu, Xilin
Guo, Kunquan
Zuo, Xianbo
Guo, Xiaohui
Yang, Handong
Zhou, Xianghai
Zhang, Xuejun
Qi, Lu
Loos, Ruth J.F.
Hu, Frank B.
Wu, Tangchun
Liu, Ying
Liu, Liegang
Yang, Ze
Hu, Renming
Jia, Weiping
Ji, Linong
Li, Yixue
Lin, Xu
author_sort Li, Huaixing
collection PubMed
description Substantial progress has been made in identification of type 2 diabetes (T2D) risk loci in the past few years, but our understanding of the genetic basis of T2D in ethnically diverse populations remains limited. We performed a genome-wide association study and a replication study in Chinese Hans comprising 8,569 T2D case subjects and 8,923 control subjects in total, from which 10 single nucleotide polymorphisms were selected for further follow-up in a de novo replication sample of 3,410 T2D case and 3,412 control subjects and an in silico replication sample of 6,952 T2D case and 11,865 control subjects. Besides confirming seven established T2D loci (CDKAL1, CDKN2A/B, KCNQ1, CDC123, GLIS3, HNF1B, and DUSP9) at genome-wide significance, we identified two novel T2D loci, including G-protein–coupled receptor kinase 5 (GRK5) (rs10886471: P = 7.1 × 10(−9)) and RASGRP1 (rs7403531: P = 3.9 × 10(−9)), of which the association signal at GRK5 seems to be specific to East Asians. In nondiabetic individuals, the T2D risk-increasing allele of RASGRP1-rs7403531 was also associated with higher HbA(1c) and lower homeostasis model assessment of β-cell function (P = 0.03 and 0.0209, respectively), whereas the T2D risk-increasing allele of GRK5-rs10886471 was also associated with higher fasting insulin (P = 0.0169) but not with fasting glucose. Our findings not only provide new insights into the pathophysiology of T2D, but may also shed light on the ethnic differences in T2D susceptibility.
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spelling pubmed-35260612014-01-01 A Genome-Wide Association Study Identifies GRK5 and RASGRP1 as Type 2 Diabetes Loci in Chinese Hans Li, Huaixing Gan, Wei Lu, Ling Dong, Xiao Han, Xueyao Hu, Cheng Yang, Zhen Sun, Liang Bao, Wei Li, Pengtao He, Meian Sun, Liangdan Wang, Yiqin Zhu, Jingwen Ning, Qianqian Tang, Yong Zhang, Rong Wen, Jie Wang, Di Zhu, Xilin Guo, Kunquan Zuo, Xianbo Guo, Xiaohui Yang, Handong Zhou, Xianghai Zhang, Xuejun Qi, Lu Loos, Ruth J.F. Hu, Frank B. Wu, Tangchun Liu, Ying Liu, Liegang Yang, Ze Hu, Renming Jia, Weiping Ji, Linong Li, Yixue Lin, Xu Diabetes Genetics/Genomes/Proteomics/Metabolomics Substantial progress has been made in identification of type 2 diabetes (T2D) risk loci in the past few years, but our understanding of the genetic basis of T2D in ethnically diverse populations remains limited. We performed a genome-wide association study and a replication study in Chinese Hans comprising 8,569 T2D case subjects and 8,923 control subjects in total, from which 10 single nucleotide polymorphisms were selected for further follow-up in a de novo replication sample of 3,410 T2D case and 3,412 control subjects and an in silico replication sample of 6,952 T2D case and 11,865 control subjects. Besides confirming seven established T2D loci (CDKAL1, CDKN2A/B, KCNQ1, CDC123, GLIS3, HNF1B, and DUSP9) at genome-wide significance, we identified two novel T2D loci, including G-protein–coupled receptor kinase 5 (GRK5) (rs10886471: P = 7.1 × 10(−9)) and RASGRP1 (rs7403531: P = 3.9 × 10(−9)), of which the association signal at GRK5 seems to be specific to East Asians. In nondiabetic individuals, the T2D risk-increasing allele of RASGRP1-rs7403531 was also associated with higher HbA(1c) and lower homeostasis model assessment of β-cell function (P = 0.03 and 0.0209, respectively), whereas the T2D risk-increasing allele of GRK5-rs10886471 was also associated with higher fasting insulin (P = 0.0169) but not with fasting glucose. Our findings not only provide new insights into the pathophysiology of T2D, but may also shed light on the ethnic differences in T2D susceptibility. American Diabetes Association 2013-01 2012-12-13 /pmc/articles/PMC3526061/ /pubmed/22961080 http://dx.doi.org/10.2337/db12-0454 Text en © 2013 by the American Diabetes Association. Readers may use this article as long as the work is properly cited, the use is educational and not for profit, and the work is not altered. See http://creativecommons.org/licenses/by-nc-nd/3.0/ for details.
spellingShingle Genetics/Genomes/Proteomics/Metabolomics
Li, Huaixing
Gan, Wei
Lu, Ling
Dong, Xiao
Han, Xueyao
Hu, Cheng
Yang, Zhen
Sun, Liang
Bao, Wei
Li, Pengtao
He, Meian
Sun, Liangdan
Wang, Yiqin
Zhu, Jingwen
Ning, Qianqian
Tang, Yong
Zhang, Rong
Wen, Jie
Wang, Di
Zhu, Xilin
Guo, Kunquan
Zuo, Xianbo
Guo, Xiaohui
Yang, Handong
Zhou, Xianghai
Zhang, Xuejun
Qi, Lu
Loos, Ruth J.F.
Hu, Frank B.
Wu, Tangchun
Liu, Ying
Liu, Liegang
Yang, Ze
Hu, Renming
Jia, Weiping
Ji, Linong
Li, Yixue
Lin, Xu
A Genome-Wide Association Study Identifies GRK5 and RASGRP1 as Type 2 Diabetes Loci in Chinese Hans
title A Genome-Wide Association Study Identifies GRK5 and RASGRP1 as Type 2 Diabetes Loci in Chinese Hans
title_full A Genome-Wide Association Study Identifies GRK5 and RASGRP1 as Type 2 Diabetes Loci in Chinese Hans
title_fullStr A Genome-Wide Association Study Identifies GRK5 and RASGRP1 as Type 2 Diabetes Loci in Chinese Hans
title_full_unstemmed A Genome-Wide Association Study Identifies GRK5 and RASGRP1 as Type 2 Diabetes Loci in Chinese Hans
title_short A Genome-Wide Association Study Identifies GRK5 and RASGRP1 as Type 2 Diabetes Loci in Chinese Hans
title_sort genome-wide association study identifies grk5 and rasgrp1 as type 2 diabetes loci in chinese hans
topic Genetics/Genomes/Proteomics/Metabolomics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3526061/
https://www.ncbi.nlm.nih.gov/pubmed/22961080
http://dx.doi.org/10.2337/db12-0454
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