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Using genetic diversity information to establish core collections of Stylosanthes capitata and Stylosanthes macrocephala

Stylosanthes species are important forage legumes in tropical and subtropical areas. S. macrocephala and S. capitata germplasm collections that consist of 134 and 192 accessions, respectively, are maintained at the Brazilian Agricultural Research Corporation Cerrados (Embrapa-Cerrados). Polymorphic...

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Autores principales: Santos-Garcia, Melissa Oliveira, de Toledo-Silva, Guilherme, Sassaki, Rodrigo Possidonio, Ferreira, Thais Helena, Resende, Rosângela Maria Simeão, Chiari, Lucimara, Karia, Cláudio Takao, Carvalho, Marcelo Ayres, Faleiro, Fábio Gelape, Zucchi, Maria Imaculada, de Souza, Anete Pereira
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Sociedade Brasileira de Genética 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3526094/
https://www.ncbi.nlm.nih.gov/pubmed/23271947
http://dx.doi.org/10.1590/S1415-47572012005000076
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author Santos-Garcia, Melissa Oliveira
de Toledo-Silva, Guilherme
Sassaki, Rodrigo Possidonio
Ferreira, Thais Helena
Resende, Rosângela Maria Simeão
Chiari, Lucimara
Karia, Cláudio Takao
Carvalho, Marcelo Ayres
Faleiro, Fábio Gelape
Zucchi, Maria Imaculada
de Souza, Anete Pereira
author_facet Santos-Garcia, Melissa Oliveira
de Toledo-Silva, Guilherme
Sassaki, Rodrigo Possidonio
Ferreira, Thais Helena
Resende, Rosângela Maria Simeão
Chiari, Lucimara
Karia, Cláudio Takao
Carvalho, Marcelo Ayres
Faleiro, Fábio Gelape
Zucchi, Maria Imaculada
de Souza, Anete Pereira
author_sort Santos-Garcia, Melissa Oliveira
collection PubMed
description Stylosanthes species are important forage legumes in tropical and subtropical areas. S. macrocephala and S. capitata germplasm collections that consist of 134 and 192 accessions, respectively, are maintained at the Brazilian Agricultural Research Corporation Cerrados (Embrapa-Cerrados). Polymorphic microsatellite markers were used to assess genetic diversity and population structure with the aim to assemble a core collection. The mean values of H(O) and H(E) for S. macrocephala were 0.08 and 0.36, respectively, whereas the means for S. capitata were 0.48 and 0.50, respectively. Roger’s genetic distance varied from 0 to 0.83 for S. macrocephala and from 0 to 0.85 for S. capitata. Analysis with STRUCTURE software distinguished five groups among the S. macrocephala accessions and four groups among those of S. capitata. Nei’s genetic diversity was 27% in S. macrocephala and 11% in S. capitata. Core collections were assembled for both species. For S. macrocephala, all of the allelic diversity was represented by 23 accessions, whereas only 13 accessions were necessary to represent all allelic diversity for S. capitata. The data presented herein evidence the population structure present in the Embrapa-Cerrados germplasm collections of S. macrocephala and S. capitata, which may be useful for breeding programs and germplasm conservation.
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spelling pubmed-35260942012-12-27 Using genetic diversity information to establish core collections of Stylosanthes capitata and Stylosanthes macrocephala Santos-Garcia, Melissa Oliveira de Toledo-Silva, Guilherme Sassaki, Rodrigo Possidonio Ferreira, Thais Helena Resende, Rosângela Maria Simeão Chiari, Lucimara Karia, Cláudio Takao Carvalho, Marcelo Ayres Faleiro, Fábio Gelape Zucchi, Maria Imaculada de Souza, Anete Pereira Genet Mol Biol Plant Genetics Stylosanthes species are important forage legumes in tropical and subtropical areas. S. macrocephala and S. capitata germplasm collections that consist of 134 and 192 accessions, respectively, are maintained at the Brazilian Agricultural Research Corporation Cerrados (Embrapa-Cerrados). Polymorphic microsatellite markers were used to assess genetic diversity and population structure with the aim to assemble a core collection. The mean values of H(O) and H(E) for S. macrocephala were 0.08 and 0.36, respectively, whereas the means for S. capitata were 0.48 and 0.50, respectively. Roger’s genetic distance varied from 0 to 0.83 for S. macrocephala and from 0 to 0.85 for S. capitata. Analysis with STRUCTURE software distinguished five groups among the S. macrocephala accessions and four groups among those of S. capitata. Nei’s genetic diversity was 27% in S. macrocephala and 11% in S. capitata. Core collections were assembled for both species. For S. macrocephala, all of the allelic diversity was represented by 23 accessions, whereas only 13 accessions were necessary to represent all allelic diversity for S. capitata. The data presented herein evidence the population structure present in the Embrapa-Cerrados germplasm collections of S. macrocephala and S. capitata, which may be useful for breeding programs and germplasm conservation. Sociedade Brasileira de Genética 2012-12 2012-11-13 /pmc/articles/PMC3526094/ /pubmed/23271947 http://dx.doi.org/10.1590/S1415-47572012005000076 Text en Copyright © 2012, Sociedade Brasileira de Genética. License information: This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Plant Genetics
Santos-Garcia, Melissa Oliveira
de Toledo-Silva, Guilherme
Sassaki, Rodrigo Possidonio
Ferreira, Thais Helena
Resende, Rosângela Maria Simeão
Chiari, Lucimara
Karia, Cláudio Takao
Carvalho, Marcelo Ayres
Faleiro, Fábio Gelape
Zucchi, Maria Imaculada
de Souza, Anete Pereira
Using genetic diversity information to establish core collections of Stylosanthes capitata and Stylosanthes macrocephala
title Using genetic diversity information to establish core collections of Stylosanthes capitata and Stylosanthes macrocephala
title_full Using genetic diversity information to establish core collections of Stylosanthes capitata and Stylosanthes macrocephala
title_fullStr Using genetic diversity information to establish core collections of Stylosanthes capitata and Stylosanthes macrocephala
title_full_unstemmed Using genetic diversity information to establish core collections of Stylosanthes capitata and Stylosanthes macrocephala
title_short Using genetic diversity information to establish core collections of Stylosanthes capitata and Stylosanthes macrocephala
title_sort using genetic diversity information to establish core collections of stylosanthes capitata and stylosanthes macrocephala
topic Plant Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3526094/
https://www.ncbi.nlm.nih.gov/pubmed/23271947
http://dx.doi.org/10.1590/S1415-47572012005000076
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