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Bayesian model selection validates a biokinetic model for zirconium processing in humans
BACKGROUND: In radiation protection, biokinetic models for zirconium processing are of crucial importance in dose estimation and further risk analysis for humans exposed to this radioactive substance. They provide limiting values of detrimental effects and build the basis for applications in interna...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3529705/ https://www.ncbi.nlm.nih.gov/pubmed/22863152 http://dx.doi.org/10.1186/1752-0509-6-95 |
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author | Schmidl, Daniel Hug, Sabine Li, Wei Bo Greiter, Matthias B Theis, Fabian J |
author_facet | Schmidl, Daniel Hug, Sabine Li, Wei Bo Greiter, Matthias B Theis, Fabian J |
author_sort | Schmidl, Daniel |
collection | PubMed |
description | BACKGROUND: In radiation protection, biokinetic models for zirconium processing are of crucial importance in dose estimation and further risk analysis for humans exposed to this radioactive substance. They provide limiting values of detrimental effects and build the basis for applications in internal dosimetry, the prediction for radioactive zirconium retention in various organs as well as retrospective dosimetry. Multi-compartmental models are the tool of choice for simulating the processing of zirconium. Although easily interpretable, determining the exact compartment structure and interaction mechanisms is generally daunting. In the context of observing the dynamics of multiple compartments, Bayesian methods provide efficient tools for model inference and selection. RESULTS: We are the first to apply a Markov chain Monte Carlo approach to compute Bayes factors for the evaluation of two competing models for zirconium processing in the human body after ingestion. Based on in vivo measurements of human plasma and urine levels we were able to show that a recently published model is superior to the standard model of the International Commission on Radiological Protection. The Bayes factors were estimated by means of the numerically stable thermodynamic integration in combination with a recently developed copula-based Metropolis-Hastings sampler. CONCLUSIONS: In contrast to the standard model the novel model predicts lower accretion of zirconium in bones. This results in lower levels of noxious doses for exposed individuals. Moreover, the Bayesian approach allows for retrospective dose assessment, including credible intervals for the initially ingested zirconium, in a significantly more reliable fashion than previously possible. All methods presented here are readily applicable to many modeling tasks in systems biology. |
format | Online Article Text |
id | pubmed-3529705 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-35297052013-01-03 Bayesian model selection validates a biokinetic model for zirconium processing in humans Schmidl, Daniel Hug, Sabine Li, Wei Bo Greiter, Matthias B Theis, Fabian J BMC Syst Biol Research Article BACKGROUND: In radiation protection, biokinetic models for zirconium processing are of crucial importance in dose estimation and further risk analysis for humans exposed to this radioactive substance. They provide limiting values of detrimental effects and build the basis for applications in internal dosimetry, the prediction for radioactive zirconium retention in various organs as well as retrospective dosimetry. Multi-compartmental models are the tool of choice for simulating the processing of zirconium. Although easily interpretable, determining the exact compartment structure and interaction mechanisms is generally daunting. In the context of observing the dynamics of multiple compartments, Bayesian methods provide efficient tools for model inference and selection. RESULTS: We are the first to apply a Markov chain Monte Carlo approach to compute Bayes factors for the evaluation of two competing models for zirconium processing in the human body after ingestion. Based on in vivo measurements of human plasma and urine levels we were able to show that a recently published model is superior to the standard model of the International Commission on Radiological Protection. The Bayes factors were estimated by means of the numerically stable thermodynamic integration in combination with a recently developed copula-based Metropolis-Hastings sampler. CONCLUSIONS: In contrast to the standard model the novel model predicts lower accretion of zirconium in bones. This results in lower levels of noxious doses for exposed individuals. Moreover, the Bayesian approach allows for retrospective dose assessment, including credible intervals for the initially ingested zirconium, in a significantly more reliable fashion than previously possible. All methods presented here are readily applicable to many modeling tasks in systems biology. BioMed Central 2012-08-05 /pmc/articles/PMC3529705/ /pubmed/22863152 http://dx.doi.org/10.1186/1752-0509-6-95 Text en Copyright ©2012 Schmidl et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License( http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Schmidl, Daniel Hug, Sabine Li, Wei Bo Greiter, Matthias B Theis, Fabian J Bayesian model selection validates a biokinetic model for zirconium processing in humans |
title | Bayesian model selection validates a biokinetic model for zirconium processing in humans |
title_full | Bayesian model selection validates a biokinetic model for zirconium processing in humans |
title_fullStr | Bayesian model selection validates a biokinetic model for zirconium processing in humans |
title_full_unstemmed | Bayesian model selection validates a biokinetic model for zirconium processing in humans |
title_short | Bayesian model selection validates a biokinetic model for zirconium processing in humans |
title_sort | bayesian model selection validates a biokinetic model for zirconium processing in humans |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3529705/ https://www.ncbi.nlm.nih.gov/pubmed/22863152 http://dx.doi.org/10.1186/1752-0509-6-95 |
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