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PRGdb 2.0: towards a community-based database model for the analysis of R-genes in plants

The Plant Resistance Genes database (PRGdb; http://prgdb.org) is a comprehensive resource on resistance genes (R-genes), a major class of genes in plant genomes that convey disease resistance against pathogens. Initiated in 2009, the database has grown more than 6-fold to recently include annotation...

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Autores principales: Sanseverino, Walter, Hermoso, Antonio, D’Alessandro, Raffaella, Vlasova, Anna, Andolfo, Giuseppe, Frusciante, Luigi, Lowy, Ernesto, Roma, Guglielmo, Ercolano, Maria Raffaella
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3531111/
https://www.ncbi.nlm.nih.gov/pubmed/23161682
http://dx.doi.org/10.1093/nar/gks1183
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author Sanseverino, Walter
Hermoso, Antonio
D’Alessandro, Raffaella
Vlasova, Anna
Andolfo, Giuseppe
Frusciante, Luigi
Lowy, Ernesto
Roma, Guglielmo
Ercolano, Maria Raffaella
author_facet Sanseverino, Walter
Hermoso, Antonio
D’Alessandro, Raffaella
Vlasova, Anna
Andolfo, Giuseppe
Frusciante, Luigi
Lowy, Ernesto
Roma, Guglielmo
Ercolano, Maria Raffaella
author_sort Sanseverino, Walter
collection PubMed
description The Plant Resistance Genes database (PRGdb; http://prgdb.org) is a comprehensive resource on resistance genes (R-genes), a major class of genes in plant genomes that convey disease resistance against pathogens. Initiated in 2009, the database has grown more than 6-fold to recently include annotation derived from recent plant genome sequencing projects. Release 2.0 currently hosts useful biological information on a set of 112 known and 104 310 putative R-genes present in 233 plant species and conferring resistance to 122 different pathogens. Moreover, the website has been completely redesigned with the implementation of Semantic MediaWiki technologies, which makes our repository freely accessed and easily edited by any scientists. To this purpose, we encourage plant biologist experts to join our annotation effort and share their knowledge on resistance-gene biology with the rest of the scientific community.
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spelling pubmed-35311112013-03-07 PRGdb 2.0: towards a community-based database model for the analysis of R-genes in plants Sanseverino, Walter Hermoso, Antonio D’Alessandro, Raffaella Vlasova, Anna Andolfo, Giuseppe Frusciante, Luigi Lowy, Ernesto Roma, Guglielmo Ercolano, Maria Raffaella Nucleic Acids Res Articles The Plant Resistance Genes database (PRGdb; http://prgdb.org) is a comprehensive resource on resistance genes (R-genes), a major class of genes in plant genomes that convey disease resistance against pathogens. Initiated in 2009, the database has grown more than 6-fold to recently include annotation derived from recent plant genome sequencing projects. Release 2.0 currently hosts useful biological information on a set of 112 known and 104 310 putative R-genes present in 233 plant species and conferring resistance to 122 different pathogens. Moreover, the website has been completely redesigned with the implementation of Semantic MediaWiki technologies, which makes our repository freely accessed and easily edited by any scientists. To this purpose, we encourage plant biologist experts to join our annotation effort and share their knowledge on resistance-gene biology with the rest of the scientific community. Oxford University Press 2013-01 2012-11-17 /pmc/articles/PMC3531111/ /pubmed/23161682 http://dx.doi.org/10.1093/nar/gks1183 Text en © The Author(s) 2012. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/3.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/3.0/), which permits non-commercial reuse, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com.
spellingShingle Articles
Sanseverino, Walter
Hermoso, Antonio
D’Alessandro, Raffaella
Vlasova, Anna
Andolfo, Giuseppe
Frusciante, Luigi
Lowy, Ernesto
Roma, Guglielmo
Ercolano, Maria Raffaella
PRGdb 2.0: towards a community-based database model for the analysis of R-genes in plants
title PRGdb 2.0: towards a community-based database model for the analysis of R-genes in plants
title_full PRGdb 2.0: towards a community-based database model for the analysis of R-genes in plants
title_fullStr PRGdb 2.0: towards a community-based database model for the analysis of R-genes in plants
title_full_unstemmed PRGdb 2.0: towards a community-based database model for the analysis of R-genes in plants
title_short PRGdb 2.0: towards a community-based database model for the analysis of R-genes in plants
title_sort prgdb 2.0: towards a community-based database model for the analysis of r-genes in plants
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3531111/
https://www.ncbi.nlm.nih.gov/pubmed/23161682
http://dx.doi.org/10.1093/nar/gks1183
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