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The cell: an image library-CCDB: a curated repository of microscopy data
The cell: an image library-CCDB (CIL-CCDB) (http://www.cellimagelibrary.org) is a searchable database and archive of cellular images. As a repository for microscopy data, it accepts all forms of cell imaging from light and electron microscopy, including multi-dimensional images, Z- and time stacks i...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3531121/ https://www.ncbi.nlm.nih.gov/pubmed/23203874 http://dx.doi.org/10.1093/nar/gks1257 |
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author | Orloff, David N. Iwasa, Janet H. Martone, Maryann E. Ellisman, Mark H. Kane, Caroline M. |
author_facet | Orloff, David N. Iwasa, Janet H. Martone, Maryann E. Ellisman, Mark H. Kane, Caroline M. |
author_sort | Orloff, David N. |
collection | PubMed |
description | The cell: an image library-CCDB (CIL-CCDB) (http://www.cellimagelibrary.org) is a searchable database and archive of cellular images. As a repository for microscopy data, it accepts all forms of cell imaging from light and electron microscopy, including multi-dimensional images, Z- and time stacks in a broad variety of raw-data formats, as well as movies and animations. The software design of CIL-CCDB was intentionally designed to allow easy incorporation of new technologies and image formats as they are developed. Currently, CIL-CCDB contains over 9250 images from 358 different species. Images are evaluated for quality and annotated with terms from 14 different ontologies in 16 different fields as well as a basic description and technical details. Since its public launch on 9 August 2010, it has been designed to serve as not only an archive but also an active site for researchers and educators. |
format | Online Article Text |
id | pubmed-3531121 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-35311212013-03-07 The cell: an image library-CCDB: a curated repository of microscopy data Orloff, David N. Iwasa, Janet H. Martone, Maryann E. Ellisman, Mark H. Kane, Caroline M. Nucleic Acids Res Articles The cell: an image library-CCDB (CIL-CCDB) (http://www.cellimagelibrary.org) is a searchable database and archive of cellular images. As a repository for microscopy data, it accepts all forms of cell imaging from light and electron microscopy, including multi-dimensional images, Z- and time stacks in a broad variety of raw-data formats, as well as movies and animations. The software design of CIL-CCDB was intentionally designed to allow easy incorporation of new technologies and image formats as they are developed. Currently, CIL-CCDB contains over 9250 images from 358 different species. Images are evaluated for quality and annotated with terms from 14 different ontologies in 16 different fields as well as a basic description and technical details. Since its public launch on 9 August 2010, it has been designed to serve as not only an archive but also an active site for researchers and educators. Oxford University Press 2013-01 2012-11-29 /pmc/articles/PMC3531121/ /pubmed/23203874 http://dx.doi.org/10.1093/nar/gks1257 Text en © The Author(s) 2012. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/3.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/3.0/), which permits non-commercial reuse, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com. |
spellingShingle | Articles Orloff, David N. Iwasa, Janet H. Martone, Maryann E. Ellisman, Mark H. Kane, Caroline M. The cell: an image library-CCDB: a curated repository of microscopy data |
title | The cell: an image library-CCDB: a curated repository of microscopy data |
title_full | The cell: an image library-CCDB: a curated repository of microscopy data |
title_fullStr | The cell: an image library-CCDB: a curated repository of microscopy data |
title_full_unstemmed | The cell: an image library-CCDB: a curated repository of microscopy data |
title_short | The cell: an image library-CCDB: a curated repository of microscopy data |
title_sort | cell: an image library-ccdb: a curated repository of microscopy data |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3531121/ https://www.ncbi.nlm.nih.gov/pubmed/23203874 http://dx.doi.org/10.1093/nar/gks1257 |
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