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The TP53 website: an integrative resource centre for the TP53 mutation database and TP53 mutant analysis

A novel resource centre for TP53 mutations and mutants has been developed (http://p53.fr). TP53 gene dysfunction can be found in the majority of human cancer types. The potential use of TP53 mutation as a biomarker for clinical studies or exposome analysis has led to the publication of thousands of...

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Autores principales: Leroy, Bernard, Fournier, Jean Louis, Ishioka, Chikashi, Monti, Paola, Inga, Alberto, Fronza, Gilberto, Soussi, Thierry
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3531172/
https://www.ncbi.nlm.nih.gov/pubmed/23161690
http://dx.doi.org/10.1093/nar/gks1033
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author Leroy, Bernard
Fournier, Jean Louis
Ishioka, Chikashi
Monti, Paola
Inga, Alberto
Fronza, Gilberto
Soussi, Thierry
author_facet Leroy, Bernard
Fournier, Jean Louis
Ishioka, Chikashi
Monti, Paola
Inga, Alberto
Fronza, Gilberto
Soussi, Thierry
author_sort Leroy, Bernard
collection PubMed
description A novel resource centre for TP53 mutations and mutants has been developed (http://p53.fr). TP53 gene dysfunction can be found in the majority of human cancer types. The potential use of TP53 mutation as a biomarker for clinical studies or exposome analysis has led to the publication of thousands of reports describing the TP53 gene status in >10 000 tumours. The UMD TP53 mutation database was created in 1990 and has been regularly updated. The 2012 release of the database has been carefully curated, and all suspicious reports have been eliminated. It is available either as a flat file that can be easily manipulated or as novel multi-platform analytical software that has been designed to analyse various aspects of TP53 mutations. Several tools to ascertain TP53 mutations are also available for download. We have developed TP53MULTLoad, a manually curated database providing comprehensive details on the properties of 2549 missense TP53 mutants. More than 100 000 entries have been arranged in 39 different activity fields, such as change of transactivation on various promoters, apoptosis or growth arrest. For several hot spot mutants, multiple gain of function activities are also included. The database can be easily browsed via a graphical user interface.
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spelling pubmed-35311722013-01-03 The TP53 website: an integrative resource centre for the TP53 mutation database and TP53 mutant analysis Leroy, Bernard Fournier, Jean Louis Ishioka, Chikashi Monti, Paola Inga, Alberto Fronza, Gilberto Soussi, Thierry Nucleic Acids Res Articles A novel resource centre for TP53 mutations and mutants has been developed (http://p53.fr). TP53 gene dysfunction can be found in the majority of human cancer types. The potential use of TP53 mutation as a biomarker for clinical studies or exposome analysis has led to the publication of thousands of reports describing the TP53 gene status in >10 000 tumours. The UMD TP53 mutation database was created in 1990 and has been regularly updated. The 2012 release of the database has been carefully curated, and all suspicious reports have been eliminated. It is available either as a flat file that can be easily manipulated or as novel multi-platform analytical software that has been designed to analyse various aspects of TP53 mutations. Several tools to ascertain TP53 mutations are also available for download. We have developed TP53MULTLoad, a manually curated database providing comprehensive details on the properties of 2549 missense TP53 mutants. More than 100 000 entries have been arranged in 39 different activity fields, such as change of transactivation on various promoters, apoptosis or growth arrest. For several hot spot mutants, multiple gain of function activities are also included. The database can be easily browsed via a graphical user interface. Oxford University Press 2013-01 2012-11-17 /pmc/articles/PMC3531172/ /pubmed/23161690 http://dx.doi.org/10.1093/nar/gks1033 Text en © The Author(s) 2012. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/3.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/3.0/), which permits non-commercial reuse, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com.
spellingShingle Articles
Leroy, Bernard
Fournier, Jean Louis
Ishioka, Chikashi
Monti, Paola
Inga, Alberto
Fronza, Gilberto
Soussi, Thierry
The TP53 website: an integrative resource centre for the TP53 mutation database and TP53 mutant analysis
title The TP53 website: an integrative resource centre for the TP53 mutation database and TP53 mutant analysis
title_full The TP53 website: an integrative resource centre for the TP53 mutation database and TP53 mutant analysis
title_fullStr The TP53 website: an integrative resource centre for the TP53 mutation database and TP53 mutant analysis
title_full_unstemmed The TP53 website: an integrative resource centre for the TP53 mutation database and TP53 mutant analysis
title_short The TP53 website: an integrative resource centre for the TP53 mutation database and TP53 mutant analysis
title_sort tp53 website: an integrative resource centre for the tp53 mutation database and tp53 mutant analysis
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3531172/
https://www.ncbi.nlm.nih.gov/pubmed/23161690
http://dx.doi.org/10.1093/nar/gks1033
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