Facing growth in the European Nucleotide Archive

The European Nucleotide Archive (ENA; http://www.ebi.ac.uk/ena/) collects, maintains and presents comprehensive nucleic acid sequence and related information as part of the permanent public scientific record. Here, we provide brief updates on ENA content developments and major service enhancements i...

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Autores principales: Cochrane, Guy, Alako, Blaise, Amid, Clara, Bower, Lawrence, Cerdeño-Tárraga, Ana, Cleland, Iain, Gibson, Richard, Goodgame, Neil, Jang, Mikyung, Kay, Simon, Leinonen, Rasko, Lin, Xiu, Lopez, Rodrigo, McWilliam, Hamish, Oisel, Arnaud, Pakseresht, Nima, Pallreddy, Swapna, Park, Youngmi, Plaister, Sheila, Radhakrishnan, Rajesh, Rivière, Stephane, Rossello, Marc, Senf, Alexander, Silvester, Nicole, Smirnov, Dmitriy, ten Hoopen, Petra, Toribio, Ana, Vaughan, Daniel, Zalunin, Vadim
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2013
Materias:
Articles
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3531187/
https://www.ncbi.nlm.nih.gov/pubmed/23203883
http://dx.doi.org/10.1093/nar/gks1175
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author Cochrane, Guy
Alako, Blaise
Amid, Clara
Bower, Lawrence
Cerdeño-Tárraga, Ana
Cleland, Iain
Gibson, Richard
Goodgame, Neil
Jang, Mikyung
Kay, Simon
Leinonen, Rasko
Lin, Xiu
Lopez, Rodrigo
McWilliam, Hamish
Oisel, Arnaud
Pakseresht, Nima
Pallreddy, Swapna
Park, Youngmi
Plaister, Sheila
Radhakrishnan, Rajesh
Rivière, Stephane
Rossello, Marc
Senf, Alexander
Silvester, Nicole
Smirnov, Dmitriy
ten Hoopen, Petra
Toribio, Ana
Vaughan, Daniel
Zalunin, Vadim
author_facet Cochrane, Guy
Alako, Blaise
Amid, Clara
Bower, Lawrence
Cerdeño-Tárraga, Ana
Cleland, Iain
Gibson, Richard
Goodgame, Neil
Jang, Mikyung
Kay, Simon
Leinonen, Rasko
Lin, Xiu
Lopez, Rodrigo
McWilliam, Hamish
Oisel, Arnaud
Pakseresht, Nima
Pallreddy, Swapna
Park, Youngmi
Plaister, Sheila
Radhakrishnan, Rajesh
Rivière, Stephane
Rossello, Marc
Senf, Alexander
Silvester, Nicole
Smirnov, Dmitriy
ten Hoopen, Petra
Toribio, Ana
Vaughan, Daniel
Zalunin, Vadim
author_sort Cochrane, Guy
collection PubMed
description The European Nucleotide Archive (ENA; http://www.ebi.ac.uk/ena/) collects, maintains and presents comprehensive nucleic acid sequence and related information as part of the permanent public scientific record. Here, we provide brief updates on ENA content developments and major service enhancements in 2012 and describe in more detail two important areas of development and policy that are driven by ongoing growth in sequencing technologies. First, we describe the ENA data warehouse, a resource for which we provide a programmatic entry point to integrated content across the breadth of ENA. Second, we detail our plans for the deployment of CRAM data compression technology in ENA.
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spelling pubmed-35311872013-03-07 Facing growth in the European Nucleotide Archive Cochrane, Guy Alako, Blaise Amid, Clara Bower, Lawrence Cerdeño-Tárraga, Ana Cleland, Iain Gibson, Richard Goodgame, Neil Jang, Mikyung Kay, Simon Leinonen, Rasko Lin, Xiu Lopez, Rodrigo McWilliam, Hamish Oisel, Arnaud Pakseresht, Nima Pallreddy, Swapna Park, Youngmi Plaister, Sheila Radhakrishnan, Rajesh Rivière, Stephane Rossello, Marc Senf, Alexander Silvester, Nicole Smirnov, Dmitriy ten Hoopen, Petra Toribio, Ana Vaughan, Daniel Zalunin, Vadim Nucleic Acids Res Articles The European Nucleotide Archive (ENA; http://www.ebi.ac.uk/ena/) collects, maintains and presents comprehensive nucleic acid sequence and related information as part of the permanent public scientific record. Here, we provide brief updates on ENA content developments and major service enhancements in 2012 and describe in more detail two important areas of development and policy that are driven by ongoing growth in sequencing technologies. First, we describe the ENA data warehouse, a resource for which we provide a programmatic entry point to integrated content across the breadth of ENA. Second, we detail our plans for the deployment of CRAM data compression technology in ENA. Oxford University Press 2013-01 2012-11-29 /pmc/articles/PMC3531187/ /pubmed/23203883 http://dx.doi.org/10.1093/nar/gks1175 Text en © The Author(s) 2012. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/3.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/3.0/), which permits non-commercial reuse, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com.
spellingShingle Articles
Cochrane, Guy
Alako, Blaise
Amid, Clara
Bower, Lawrence
Cerdeño-Tárraga, Ana
Cleland, Iain
Gibson, Richard
Goodgame, Neil
Jang, Mikyung
Kay, Simon
Leinonen, Rasko
Lin, Xiu
Lopez, Rodrigo
McWilliam, Hamish
Oisel, Arnaud
Pakseresht, Nima
Pallreddy, Swapna
Park, Youngmi
Plaister, Sheila
Radhakrishnan, Rajesh
Rivière, Stephane
Rossello, Marc
Senf, Alexander
Silvester, Nicole
Smirnov, Dmitriy
ten Hoopen, Petra
Toribio, Ana
Vaughan, Daniel
Zalunin, Vadim
Facing growth in the European Nucleotide Archive
title Facing growth in the European Nucleotide Archive
title_full Facing growth in the European Nucleotide Archive
title_fullStr Facing growth in the European Nucleotide Archive
title_full_unstemmed Facing growth in the European Nucleotide Archive
title_short Facing growth in the European Nucleotide Archive
title_sort facing growth in the european nucleotide archive
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3531187/
https://www.ncbi.nlm.nih.gov/pubmed/23203883
http://dx.doi.org/10.1093/nar/gks1175
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