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Metabolic Variability in Micro-Populations
Biological cells in a population are variable in practically every property. Much is known about how variability of single cells is reflected in the statistical properties of infinitely large populations; however, many biologically relevant situations entail finite times and intermediate-sized popul...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3531411/ https://www.ncbi.nlm.nih.gov/pubmed/23300596 http://dx.doi.org/10.1371/journal.pone.0052105 |
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author | Elhanati, Yuval Brenner, Naama |
author_facet | Elhanati, Yuval Brenner, Naama |
author_sort | Elhanati, Yuval |
collection | PubMed |
description | Biological cells in a population are variable in practically every property. Much is known about how variability of single cells is reflected in the statistical properties of infinitely large populations; however, many biologically relevant situations entail finite times and intermediate-sized populations. The statistical properties of an ensemble of finite populations then come into focus, raising questions concerning inter-population variability and dependence on initial conditions. Recent technologies of microfluidic and microdroplet-based population growth realize these situations and make them immediately relevant for experiments and biotechnological application. We here study the statistical properties, arising from metabolic variability of single cells, in an ensemble of micro-populations grown to saturation in a finite environment such as a micro-droplet. We develop a discrete stochastic model for this growth process, describing the possible histories as a random walk in a phenotypic space with an absorbing boundary. Using a mapping to Polya’s Urn, a classic problem of probability theory, we find that distributions approach a limiting inoculum-dependent form after a large number of divisions. Thus, population size and structure are random variables whose mean, variance and in general their distribution can reflect initial conditions after many generations of growth. Implications of our results to experiments and to biotechnology are discussed. |
format | Online Article Text |
id | pubmed-3531411 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-35314112013-01-08 Metabolic Variability in Micro-Populations Elhanati, Yuval Brenner, Naama PLoS One Research Article Biological cells in a population are variable in practically every property. Much is known about how variability of single cells is reflected in the statistical properties of infinitely large populations; however, many biologically relevant situations entail finite times and intermediate-sized populations. The statistical properties of an ensemble of finite populations then come into focus, raising questions concerning inter-population variability and dependence on initial conditions. Recent technologies of microfluidic and microdroplet-based population growth realize these situations and make them immediately relevant for experiments and biotechnological application. We here study the statistical properties, arising from metabolic variability of single cells, in an ensemble of micro-populations grown to saturation in a finite environment such as a micro-droplet. We develop a discrete stochastic model for this growth process, describing the possible histories as a random walk in a phenotypic space with an absorbing boundary. Using a mapping to Polya’s Urn, a classic problem of probability theory, we find that distributions approach a limiting inoculum-dependent form after a large number of divisions. Thus, population size and structure are random variables whose mean, variance and in general their distribution can reflect initial conditions after many generations of growth. Implications of our results to experiments and to biotechnology are discussed. Public Library of Science 2012-12-27 /pmc/articles/PMC3531411/ /pubmed/23300596 http://dx.doi.org/10.1371/journal.pone.0052105 Text en © 2012 Elhanati, Brenner http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Elhanati, Yuval Brenner, Naama Metabolic Variability in Micro-Populations |
title | Metabolic Variability in Micro-Populations |
title_full | Metabolic Variability in Micro-Populations |
title_fullStr | Metabolic Variability in Micro-Populations |
title_full_unstemmed | Metabolic Variability in Micro-Populations |
title_short | Metabolic Variability in Micro-Populations |
title_sort | metabolic variability in micro-populations |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3531411/ https://www.ncbi.nlm.nih.gov/pubmed/23300596 http://dx.doi.org/10.1371/journal.pone.0052105 |
work_keys_str_mv | AT elhanatiyuval metabolicvariabilityinmicropopulations AT brennernaama metabolicvariabilityinmicropopulations |