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Metabolic Variability in Micro-Populations

Biological cells in a population are variable in practically every property. Much is known about how variability of single cells is reflected in the statistical properties of infinitely large populations; however, many biologically relevant situations entail finite times and intermediate-sized popul...

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Detalles Bibliográficos
Autores principales: Elhanati, Yuval, Brenner, Naama
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3531411/
https://www.ncbi.nlm.nih.gov/pubmed/23300596
http://dx.doi.org/10.1371/journal.pone.0052105
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author Elhanati, Yuval
Brenner, Naama
author_facet Elhanati, Yuval
Brenner, Naama
author_sort Elhanati, Yuval
collection PubMed
description Biological cells in a population are variable in practically every property. Much is known about how variability of single cells is reflected in the statistical properties of infinitely large populations; however, many biologically relevant situations entail finite times and intermediate-sized populations. The statistical properties of an ensemble of finite populations then come into focus, raising questions concerning inter-population variability and dependence on initial conditions. Recent technologies of microfluidic and microdroplet-based population growth realize these situations and make them immediately relevant for experiments and biotechnological application. We here study the statistical properties, arising from metabolic variability of single cells, in an ensemble of micro-populations grown to saturation in a finite environment such as a micro-droplet. We develop a discrete stochastic model for this growth process, describing the possible histories as a random walk in a phenotypic space with an absorbing boundary. Using a mapping to Polya’s Urn, a classic problem of probability theory, we find that distributions approach a limiting inoculum-dependent form after a large number of divisions. Thus, population size and structure are random variables whose mean, variance and in general their distribution can reflect initial conditions after many generations of growth. Implications of our results to experiments and to biotechnology are discussed.
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spelling pubmed-35314112013-01-08 Metabolic Variability in Micro-Populations Elhanati, Yuval Brenner, Naama PLoS One Research Article Biological cells in a population are variable in practically every property. Much is known about how variability of single cells is reflected in the statistical properties of infinitely large populations; however, many biologically relevant situations entail finite times and intermediate-sized populations. The statistical properties of an ensemble of finite populations then come into focus, raising questions concerning inter-population variability and dependence on initial conditions. Recent technologies of microfluidic and microdroplet-based population growth realize these situations and make them immediately relevant for experiments and biotechnological application. We here study the statistical properties, arising from metabolic variability of single cells, in an ensemble of micro-populations grown to saturation in a finite environment such as a micro-droplet. We develop a discrete stochastic model for this growth process, describing the possible histories as a random walk in a phenotypic space with an absorbing boundary. Using a mapping to Polya’s Urn, a classic problem of probability theory, we find that distributions approach a limiting inoculum-dependent form after a large number of divisions. Thus, population size and structure are random variables whose mean, variance and in general their distribution can reflect initial conditions after many generations of growth. Implications of our results to experiments and to biotechnology are discussed. Public Library of Science 2012-12-27 /pmc/articles/PMC3531411/ /pubmed/23300596 http://dx.doi.org/10.1371/journal.pone.0052105 Text en © 2012 Elhanati, Brenner http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Elhanati, Yuval
Brenner, Naama
Metabolic Variability in Micro-Populations
title Metabolic Variability in Micro-Populations
title_full Metabolic Variability in Micro-Populations
title_fullStr Metabolic Variability in Micro-Populations
title_full_unstemmed Metabolic Variability in Micro-Populations
title_short Metabolic Variability in Micro-Populations
title_sort metabolic variability in micro-populations
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3531411/
https://www.ncbi.nlm.nih.gov/pubmed/23300596
http://dx.doi.org/10.1371/journal.pone.0052105
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