Cargando…
Detecting the borders between coding and non-coding DNA regions in prokaryotes based on recursive segmentation and nucleotide doublets statistics
BACKGROUND: Detecting the borders between coding and non-coding regions is an essential step in the genome annotation. And information entropy measures are useful for describing the signals in genome sequence. However, the accuracies of previous methods of finding borders based on entropy segmentati...
Autores principales: | Deng, Suping, Shi, Yixiang, Yuan, Liyun, Li, Yixue, Ding, Guohui |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2012
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3535712/ https://www.ncbi.nlm.nih.gov/pubmed/23282225 http://dx.doi.org/10.1186/1471-2164-13-S8-S19 |
Ejemplares similares
-
Classifying Coding DNA with Nucleotide Statistics
por: Carels, Nicolas, et al.
Publicado: (2009) -
Evolutionary pressures on simple sequence repeats in prokaryotic coding regions
por: Lin, Wei-Hsiang, et al.
Publicado: (2012) -
SeqCode: a nomenclatural code for prokaryotes described from sequence data
por: Hedlund, Brian P., et al.
Publicado: (2022) -
ntHash: recursive nucleotide hashing
por: Mohamadi, Hamid, et al.
Publicado: (2016) -
CodingMotif: exact determination of overrepresented nucleotide motifs in coding sequences
por: Ding, Yang, et al.
Publicado: (2012)