Cargando…

Fourier domain closed-form formulas for estimation of kinetic parameters in reversible multi-compartment models

BACKGROUND: Compared with static imaging, dynamic emission computed tomographic imaging with compartment modeling can quantify in vivo physiologic processes, providing useful information about molecular disease processes. Dynamic imaging involves estimation of kinetic rate parameters. For multi-comp...

Descripción completa

Detalles Bibliográficos
Autores principales: Zeng, Gengsheng L, Kadrmas, Dan J, Gullberg, Grant T
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3538570/
https://www.ncbi.nlm.nih.gov/pubmed/22995548
http://dx.doi.org/10.1186/1475-925X-11-70
_version_ 1782254965652193280
author Zeng, Gengsheng L
Kadrmas, Dan J
Gullberg, Grant T
author_facet Zeng, Gengsheng L
Kadrmas, Dan J
Gullberg, Grant T
author_sort Zeng, Gengsheng L
collection PubMed
description BACKGROUND: Compared with static imaging, dynamic emission computed tomographic imaging with compartment modeling can quantify in vivo physiologic processes, providing useful information about molecular disease processes. Dynamic imaging involves estimation of kinetic rate parameters. For multi-compartment models, kinetic parameter estimation can be computationally demanding and problematic with local minima. METHODS: This paper offers a new perspective to the compartment model fitting problem where Fourier linear system theory is applied to derive closed-form formulas for estimating kinetic parameters for the two-compartment model. The proposed Fourier domain estimation method provides a unique solution, and offers very different noise response as compared to traditional non-linear chi-squared minimization techniques. RESULTS: The unique feature of the proposed Fourier domain method is that only low frequency components are used for kinetic parameter estimation, where the DC (i.e., the zero frequency) component in the data is treated as the most important information, and high frequency components that tend to be corrupted by statistical noise are discarded. Computer simulations show that the proposed method is robust without having to specify the initial condition. The resultant solution can be fine tuned using the traditional iterative method. CONCLUSIONS: The proposed Fourier-domain estimation method has closed-form formulas. The proposed Fourier-domain curve-fitting method does not require an initial condition, it minimizes a quadratic objective function and a closed-form solution can be obtained. The noise is easier to control, simply by discarding the high frequency components, and emphasizing the DC component.
format Online
Article
Text
id pubmed-3538570
institution National Center for Biotechnology Information
language English
publishDate 2012
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-35385702013-01-10 Fourier domain closed-form formulas for estimation of kinetic parameters in reversible multi-compartment models Zeng, Gengsheng L Kadrmas, Dan J Gullberg, Grant T Biomed Eng Online Research BACKGROUND: Compared with static imaging, dynamic emission computed tomographic imaging with compartment modeling can quantify in vivo physiologic processes, providing useful information about molecular disease processes. Dynamic imaging involves estimation of kinetic rate parameters. For multi-compartment models, kinetic parameter estimation can be computationally demanding and problematic with local minima. METHODS: This paper offers a new perspective to the compartment model fitting problem where Fourier linear system theory is applied to derive closed-form formulas for estimating kinetic parameters for the two-compartment model. The proposed Fourier domain estimation method provides a unique solution, and offers very different noise response as compared to traditional non-linear chi-squared minimization techniques. RESULTS: The unique feature of the proposed Fourier domain method is that only low frequency components are used for kinetic parameter estimation, where the DC (i.e., the zero frequency) component in the data is treated as the most important information, and high frequency components that tend to be corrupted by statistical noise are discarded. Computer simulations show that the proposed method is robust without having to specify the initial condition. The resultant solution can be fine tuned using the traditional iterative method. CONCLUSIONS: The proposed Fourier-domain estimation method has closed-form formulas. The proposed Fourier-domain curve-fitting method does not require an initial condition, it minimizes a quadratic objective function and a closed-form solution can be obtained. The noise is easier to control, simply by discarding the high frequency components, and emphasizing the DC component. BioMed Central 2012-09-20 /pmc/articles/PMC3538570/ /pubmed/22995548 http://dx.doi.org/10.1186/1475-925X-11-70 Text en Copyright ©2012 Zeng et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research
Zeng, Gengsheng L
Kadrmas, Dan J
Gullberg, Grant T
Fourier domain closed-form formulas for estimation of kinetic parameters in reversible multi-compartment models
title Fourier domain closed-form formulas for estimation of kinetic parameters in reversible multi-compartment models
title_full Fourier domain closed-form formulas for estimation of kinetic parameters in reversible multi-compartment models
title_fullStr Fourier domain closed-form formulas for estimation of kinetic parameters in reversible multi-compartment models
title_full_unstemmed Fourier domain closed-form formulas for estimation of kinetic parameters in reversible multi-compartment models
title_short Fourier domain closed-form formulas for estimation of kinetic parameters in reversible multi-compartment models
title_sort fourier domain closed-form formulas for estimation of kinetic parameters in reversible multi-compartment models
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3538570/
https://www.ncbi.nlm.nih.gov/pubmed/22995548
http://dx.doi.org/10.1186/1475-925X-11-70
work_keys_str_mv AT zenggengshengl fourierdomainclosedformformulasforestimationofkineticparametersinreversiblemulticompartmentmodels
AT kadrmasdanj fourierdomainclosedformformulasforestimationofkineticparametersinreversiblemulticompartmentmodels
AT gullberggrantt fourierdomainclosedformformulasforestimationofkineticparametersinreversiblemulticompartmentmodels