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Changes in soil bacterial community triggered by drought-induced gap succession preceded changes in soil C stocks and quality
The aim of this study was to understand how drought-induced tree mortality and subsequent secondary succession would affect soil bacterial taxonomic composition as well as soil organic matter (SOM) quantity and quality in a mixed Mediterranean forest where the Scots pine (Pinus sylvestris) populatio...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Blackwell Publishing Ltd
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3538997/ https://www.ncbi.nlm.nih.gov/pubmed/23301169 http://dx.doi.org/10.1002/ece3.409 |
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author | Yuste, Jorge Curiel Barba, Josep Fernandez-Gonzalez, Antonio José Fernandez-Lopez, Manuel Mattana, Stefania Martinez-Vilalta, Jordi Nolis, Pau Lloret, Francisco |
author_facet | Yuste, Jorge Curiel Barba, Josep Fernandez-Gonzalez, Antonio José Fernandez-Lopez, Manuel Mattana, Stefania Martinez-Vilalta, Jordi Nolis, Pau Lloret, Francisco |
author_sort | Yuste, Jorge Curiel |
collection | PubMed |
description | The aim of this study was to understand how drought-induced tree mortality and subsequent secondary succession would affect soil bacterial taxonomic composition as well as soil organic matter (SOM) quantity and quality in a mixed Mediterranean forest where the Scots pine (Pinus sylvestris) population, affected by climatic drought-induced die-off, is being replaced by Holm-oaks (HO; Quercus ilex). We apply a high throughput DNA pyrosequencing technique and (13)C solid-state Nuclear Magnetic Resonance (CP-MAS (13)C NMR) to soils within areas of influence (defined as an surface with 2-m radius around the trunk) of different trees: healthy and affected (defoliated) pines, pines that died a decade ago and healthy HOs. Soil respiration was also measured in the same spots during a spring campaign using a static close-chamber method (soda lime). A decade after death, and before aerial colonization by the more competitive HOs have even taken place, we could not find changes in soil C pools (quantity and/or quality) associated with tree mortality and secondary succession. Unlike C pools, bacterial diversity and community structure were strongly determined by tree mortality. Convergence between the most abundant taxa of soil bacterial communities under dead pines and colonizer trees (HOs) further suggests that physical gap colonization was occurring below-ground before above-ground colonization was taken place. Significantly higher soil respiration rates under dead trees, together with higher bacterial diversity and anomalously high representation of bacteria commonly associated with copiotrophic environments (r-strategic bacteria) further gives indications of how drought-induced tree mortality and secondary succession were influencing the structure of microbial communities and the metabolic activity of soils. |
format | Online Article Text |
id | pubmed-3538997 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Blackwell Publishing Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-35389972013-01-08 Changes in soil bacterial community triggered by drought-induced gap succession preceded changes in soil C stocks and quality Yuste, Jorge Curiel Barba, Josep Fernandez-Gonzalez, Antonio José Fernandez-Lopez, Manuel Mattana, Stefania Martinez-Vilalta, Jordi Nolis, Pau Lloret, Francisco Ecol Evol Original Research The aim of this study was to understand how drought-induced tree mortality and subsequent secondary succession would affect soil bacterial taxonomic composition as well as soil organic matter (SOM) quantity and quality in a mixed Mediterranean forest where the Scots pine (Pinus sylvestris) population, affected by climatic drought-induced die-off, is being replaced by Holm-oaks (HO; Quercus ilex). We apply a high throughput DNA pyrosequencing technique and (13)C solid-state Nuclear Magnetic Resonance (CP-MAS (13)C NMR) to soils within areas of influence (defined as an surface with 2-m radius around the trunk) of different trees: healthy and affected (defoliated) pines, pines that died a decade ago and healthy HOs. Soil respiration was also measured in the same spots during a spring campaign using a static close-chamber method (soda lime). A decade after death, and before aerial colonization by the more competitive HOs have even taken place, we could not find changes in soil C pools (quantity and/or quality) associated with tree mortality and secondary succession. Unlike C pools, bacterial diversity and community structure were strongly determined by tree mortality. Convergence between the most abundant taxa of soil bacterial communities under dead pines and colonizer trees (HOs) further suggests that physical gap colonization was occurring below-ground before above-ground colonization was taken place. Significantly higher soil respiration rates under dead trees, together with higher bacterial diversity and anomalously high representation of bacteria commonly associated with copiotrophic environments (r-strategic bacteria) further gives indications of how drought-induced tree mortality and secondary succession were influencing the structure of microbial communities and the metabolic activity of soils. Blackwell Publishing Ltd 2012-12 2012-11-02 /pmc/articles/PMC3538997/ /pubmed/23301169 http://dx.doi.org/10.1002/ece3.409 Text en © 2012 Published by Blackwell Publishing Ltd. http://creativecommons.org/licenses/by/2.5/ Re-use of this article is permitted in accordance with the Creative Commons Deed, Attribution 2.5, which does not permit commercial exploitation. |
spellingShingle | Original Research Yuste, Jorge Curiel Barba, Josep Fernandez-Gonzalez, Antonio José Fernandez-Lopez, Manuel Mattana, Stefania Martinez-Vilalta, Jordi Nolis, Pau Lloret, Francisco Changes in soil bacterial community triggered by drought-induced gap succession preceded changes in soil C stocks and quality |
title | Changes in soil bacterial community triggered by drought-induced gap succession preceded changes in soil C stocks and quality |
title_full | Changes in soil bacterial community triggered by drought-induced gap succession preceded changes in soil C stocks and quality |
title_fullStr | Changes in soil bacterial community triggered by drought-induced gap succession preceded changes in soil C stocks and quality |
title_full_unstemmed | Changes in soil bacterial community triggered by drought-induced gap succession preceded changes in soil C stocks and quality |
title_short | Changes in soil bacterial community triggered by drought-induced gap succession preceded changes in soil C stocks and quality |
title_sort | changes in soil bacterial community triggered by drought-induced gap succession preceded changes in soil c stocks and quality |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3538997/ https://www.ncbi.nlm.nih.gov/pubmed/23301169 http://dx.doi.org/10.1002/ece3.409 |
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