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How deep is deep enough for RNA-Seq profiling of bacterial transcriptomes?

BACKGROUND: High-throughput sequencing of cDNA libraries (RNA-Seq) has proven to be a highly effective approach for studying bacterial transcriptomes. A central challenge in designing RNA-Seq-based experiments is estimating a priori the number of reads per sample needed to detect and quantify thousa...

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Detalles Bibliográficos
Autores principales: Haas, Brian J, Chin, Melissa, Nusbaum, Chad, Birren, Bruce W, Livny, Jonathan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3543199/
https://www.ncbi.nlm.nih.gov/pubmed/23270466
http://dx.doi.org/10.1186/1471-2164-13-734

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