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Microsatellites in the Endangered Species Dyckia distachya (Bromeliaceae) and Cross-Amplification in Other Bromeliads

Microsatellite markers were isolated in Dyckia distachya, an endangered bromeliad from southern Brazil, which will be useful to assess the population genetic structure and reproductive success in introduced and natural populations of this species. Twenty microsatellite loci were developed from an en...

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Autores principales: Zanella, Camila M., Janke, Aline, Paggi, Gecele M., Goetze, Márcia, Reis, Mauricio S., Bered, Fernanda
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Molecular Diversity Preservation International (MDPI) 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3546666/
https://www.ncbi.nlm.nih.gov/pubmed/23443098
http://dx.doi.org/10.3390/ijms131215859
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author Zanella, Camila M.
Janke, Aline
Paggi, Gecele M.
Goetze, Márcia
Reis, Mauricio S.
Bered, Fernanda
author_facet Zanella, Camila M.
Janke, Aline
Paggi, Gecele M.
Goetze, Márcia
Reis, Mauricio S.
Bered, Fernanda
author_sort Zanella, Camila M.
collection PubMed
description Microsatellite markers were isolated in Dyckia distachya, an endangered bromeliad from southern Brazil, which will be useful to assess the population genetic structure and reproductive success in introduced and natural populations of this species. Twenty microsatellite loci were developed from an enriched genomic library, and nine of these were amplified. The loci were characterized in 43 individuals from introduced and wild D. distachya populations. All nine loci were polymorphic, with four to ten alleles per locus. In an introduced population the observed and expected heterozygosities ranged from 0.136–0.667 and 0.543–0.877, respectively, while in a wild population it ranged from 0.000 to 0.895 and from 0.050 to 0.811, respectively. The development of these microsatellite markers will contribute to investigations of the reproductive potential and viability of introduced populations of D. distachya as well as the single known wild population. Cross-amplification in other Bromeliaceae species was successful, with high rates in four loci, demonstrating the applicability of these microsatellite markers in other taxa.
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spelling pubmed-35466662013-01-23 Microsatellites in the Endangered Species Dyckia distachya (Bromeliaceae) and Cross-Amplification in Other Bromeliads Zanella, Camila M. Janke, Aline Paggi, Gecele M. Goetze, Márcia Reis, Mauricio S. Bered, Fernanda Int J Mol Sci Article Microsatellite markers were isolated in Dyckia distachya, an endangered bromeliad from southern Brazil, which will be useful to assess the population genetic structure and reproductive success in introduced and natural populations of this species. Twenty microsatellite loci were developed from an enriched genomic library, and nine of these were amplified. The loci were characterized in 43 individuals from introduced and wild D. distachya populations. All nine loci were polymorphic, with four to ten alleles per locus. In an introduced population the observed and expected heterozygosities ranged from 0.136–0.667 and 0.543–0.877, respectively, while in a wild population it ranged from 0.000 to 0.895 and from 0.050 to 0.811, respectively. The development of these microsatellite markers will contribute to investigations of the reproductive potential and viability of introduced populations of D. distachya as well as the single known wild population. Cross-amplification in other Bromeliaceae species was successful, with high rates in four loci, demonstrating the applicability of these microsatellite markers in other taxa. Molecular Diversity Preservation International (MDPI) 2012-11-27 /pmc/articles/PMC3546666/ /pubmed/23443098 http://dx.doi.org/10.3390/ijms131215859 Text en © 2012 by the authors; licensee Molecular Diversity Preservation International, Basel, Switzerland. http://creativecommons.org/licenses/by/3.0 This article is an open-access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Article
Zanella, Camila M.
Janke, Aline
Paggi, Gecele M.
Goetze, Márcia
Reis, Mauricio S.
Bered, Fernanda
Microsatellites in the Endangered Species Dyckia distachya (Bromeliaceae) and Cross-Amplification in Other Bromeliads
title Microsatellites in the Endangered Species Dyckia distachya (Bromeliaceae) and Cross-Amplification in Other Bromeliads
title_full Microsatellites in the Endangered Species Dyckia distachya (Bromeliaceae) and Cross-Amplification in Other Bromeliads
title_fullStr Microsatellites in the Endangered Species Dyckia distachya (Bromeliaceae) and Cross-Amplification in Other Bromeliads
title_full_unstemmed Microsatellites in the Endangered Species Dyckia distachya (Bromeliaceae) and Cross-Amplification in Other Bromeliads
title_short Microsatellites in the Endangered Species Dyckia distachya (Bromeliaceae) and Cross-Amplification in Other Bromeliads
title_sort microsatellites in the endangered species dyckia distachya (bromeliaceae) and cross-amplification in other bromeliads
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3546666/
https://www.ncbi.nlm.nih.gov/pubmed/23443098
http://dx.doi.org/10.3390/ijms131215859
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