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Efficient known ncRNA search including pseudoknots

BACKGROUND: Searching for members of characterized ncRNA families containing pseudoknots is an important component of genome-scale ncRNA annotation. However, the state-of-the-art known ncRNA search is based on context-free grammar (CFG), which cannot effectively model pseudoknots. Thus, existing CFG...

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Detalles Bibliográficos
Autores principales: Yuan, Cheng, Sun, Yanni
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3549841/
https://www.ncbi.nlm.nih.gov/pubmed/23369049
http://dx.doi.org/10.1186/1471-2105-14-S2-S25

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