Cargando…

CpGIMethPred: computational model for predicting methylation status of CpG islands in human genome

DNA methylation is an inheritable chemical modification of cytosine, and represents one of the most important epigenetic events. Computational prediction of the DNA methylation status can be employed to speed up the genome-wide methylation profiling, and to identify the key features that are correla...

Descripción completa

Detalles Bibliográficos
Autores principales:	Zheng, Hao, Wu, Hongwei, Li, Jinping, Jiang, Shi-Wen
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2013
Materias:	Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3552668/ https://www.ncbi.nlm.nih.gov/pubmed/23369266 http://dx.doi.org/10.1186/1755-8794-6-S1-S13

Ejemplares similares

Preservation of methylated CpG dinucleotides in human CpG islands
por: Panchin, Alexander Y., et al.
Publicado: (2016)

Factors to preserve CpG-rich sequences in methylated CpG islands
por: Miyahara, Hiroki, et al.
Publicado: (2015)

CpG Methylation Altered the Stability and Structure of the i-Motifs Located in the CpG Islands
por: Oshikawa, Daiki, et al.
Publicado: (2022)

Evaluation of single CpG sites as proxies of CpG island methylation states at the genome scale
por: Barrera, Víctor, et al.
Publicado: (2012)

Deoxyribonucleic acid methylation profiling of single human blastocysts by methylated CpG-island amplification coupled with CpG-island microarray
por: Huntriss, John, et al.
Publicado: (2015)

CpGIF: an algorithm for the identification of CpG islands
por: Sujuan, Ye, et al.
Publicado: (2008)

Bidding the CpG island goodbye
por: Greally, John M
Publicado: (2013)

CpGPAP: CpG island predictor analysis platform
por: Chuang, Li-Yeh, et al.
Publicado: (2012)

Prediction of CpG-island function: CpG clustering vs. sliding-window methods
por: Hackenberg, Michael, et al.
Publicado: (2010)

MIRA-seq for DNA methylation analysis of CpG islands
por: Jung, Marc, et al.
Publicado: (2015)

The CpG island methylator phenotype (CIMP) in colorectal cancer
por: Mojarad, Ehsan Nazemalhosseini, et al.
Publicado: (2013)

Modeling methylation dynamics with simultaneous changes in CpG islands
por: Grosser, Konrad, et al.
Publicado: (2020)

Engineering CpG island DNA methylation in pluripotent cells through synthetic CpG-free ssDNA insertion
por: Tompkins, Joshua, et al.
Publicado: (2023)

Methylation kinetics and CpG-island methylator phenotyope status in colorectal cancer cell lines
por: Wodarz, Dominik, et al.
Publicado: (2013)

Evolutionary Origin and Methylation Status of Human Intronic CpG Islands that Are Not Present in Mouse
por: Rademacher, Katrin, et al.
Publicado: (2014)

In Vivo Control of CpG and Non-CpG DNA Methylation by DNA Methyltransferases
por: Arand, Julia, et al.
Publicado: (2012)

CpG and Non-CpG Methylation in Epigenetic Gene Regulation and Brain Function
por: Jang, Hyun Sik, et al.
Publicado: (2017)

The Effects of O(6)-methyl Guanine DNA-methyl Transferase Promotor Methylation and CpG1, CpG2, CpG3 and CpG4 Methylation on Treatment Response and their Prognostic Significance in Patients with Glioblastoma
por: Yildiz, OG, et al.
Publicado: (2020)

CpG Island Mapping by Epigenome Prediction
por: Bock, Christoph, et al.
Publicado: (2007)

Orphan CpG islands as alternative promoters
por: Sarda, Shrutii, et al.
Publicado: (2017)

Dynamic CpG island methylation landscape in oocytes and preimplantation embryos
por: Smallwood, Sébastien A., et al.
Publicado: (2011)

CpG-island methylation study of liver fluke-related cholangiocarcinoma
por: Sriraksa, R, et al.
Publicado: (2011)

CpG Island Methylation in Colorectal Cancer: Past, Present and Future
por: Curtin, Karen, et al.
Publicado: (2011)

Occurrence of HHIP gene CpG island methylation in gastric cancer
por: SONG, YU, et al.
Publicado: (2014)

Prognostic Significance of CpG Island Methylator Phenotype in Colorectal Cancer
por: Joo, Young-Eun
Publicado: (2015)

Prognostic value of CpG island methylator phenotype in gastric cancer
por: Xiao, Huashi, et al.
Publicado: (2018)

Methylation Analysis of CpG Islands in Pineapple SERK1 Promoter
por: Luan, Aiping, et al.
Publicado: (2020)

Advances in CpG Island Methylator Phenotype Colorectal Cancer Therapies
por: Zhang, Xiaofei, et al.
Publicado: (2021)

Loss of CpG island immunity to DNA methylation induced by mutation
por: Horsthemke, Bernhard, et al.
Publicado: (2023)

CpG islands or CpG clusters: how to identify functional GC-rich regions in a genome?
por: Han, Leng, et al.
Publicado: (2009)

In silico identification of single nucleotide variations at CpG sites regulating CpG island existence and size
por: Shyamala, Nivas, et al.
Publicado: (2022)

CpGcluster: a distance-based algorithm for CpG-island detection
por: Hackenberg, Michael, et al.
Publicado: (2006)

Retrotransposition creates sloping shores: a graded influence of hypomethylated CpG islands on flanking CpG sites
por: Grandi, Fiorella C., et al.
Publicado: (2015)

Cytosine methylation at CpCpG sites triggers accumulation of non-CpG methylation in gene bodies
por: Zabet, Nicolae Radu, et al.
Publicado: (2017)

Methylation Linear Discriminant Analysis (MLDA) for identifying differentially methylated CpG islands
por: Dai, Wei, et al.
Publicado: (2008)

The Control Region of Mitochondrial DNA Shows an Unusual CpG and Non-CpG Methylation Pattern
por: Bellizzi, Dina, et al.
Publicado: (2013)

Low biological fluctuation of mitochondrial CpG and non-CpG methylation at the single-molecule level
por: Goldsmith, Chloe, et al.
Publicado: (2021)

CpG Islands: Starting Blocks for Replication and Transcription
por: Prioleau, Marie-Noëlle
Publicado: (2009)

CpG island hypermethylation go circular (RNA)
por: Dragomir, Mihnea P., et al.
Publicado: (2018)

Intragenic CpG Islands and Their Impact on Gene Regulation
por: Cain, James A., et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_8mu8gqbtqsmog6kdbaidd4k2cp