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Activity-regulated RNA editing in select neuronal subfields in hippocampus
RNA editing by adensosine deaminases is a widespread mechanism to alter genetic information in metazoa. In addition to modifications in non-coding regions, editing contributes to diversification of protein function, in analogy to alternative splicing. However, although splicing programs respond to e...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3553983/ https://www.ncbi.nlm.nih.gov/pubmed/23172290 http://dx.doi.org/10.1093/nar/gks1045 |
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author | Balik, Ales Penn, Andrew C. Nemoda, Zsofia Greger, Ingo H. |
author_facet | Balik, Ales Penn, Andrew C. Nemoda, Zsofia Greger, Ingo H. |
author_sort | Balik, Ales |
collection | PubMed |
description | RNA editing by adensosine deaminases is a widespread mechanism to alter genetic information in metazoa. In addition to modifications in non-coding regions, editing contributes to diversification of protein function, in analogy to alternative splicing. However, although splicing programs respond to external signals, facilitating fine tuning and homeostasis of cellular functions, a similar regulation has not been described for RNA editing. Here, we show that the AMPA receptor R/G editing site is dynamically regulated in the hippocampus in response to activity. These changes are bi-directional, reversible and correlate with levels of the editase Adar2. This regulation is observed in the CA1 hippocampal subfield but not in CA3 and is thus subfield/celltype-specific. Moreover, alternative splicing of the flip/flop cassette downstream of the R/G site is closely linked to the editing state, which is regulated by Ca(2+). Our data show that A-to-I RNA editing has the capacity to tune protein function in response to external stimuli. |
format | Online Article Text |
id | pubmed-3553983 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-35539832013-01-24 Activity-regulated RNA editing in select neuronal subfields in hippocampus Balik, Ales Penn, Andrew C. Nemoda, Zsofia Greger, Ingo H. Nucleic Acids Res RNA RNA editing by adensosine deaminases is a widespread mechanism to alter genetic information in metazoa. In addition to modifications in non-coding regions, editing contributes to diversification of protein function, in analogy to alternative splicing. However, although splicing programs respond to external signals, facilitating fine tuning and homeostasis of cellular functions, a similar regulation has not been described for RNA editing. Here, we show that the AMPA receptor R/G editing site is dynamically regulated in the hippocampus in response to activity. These changes are bi-directional, reversible and correlate with levels of the editase Adar2. This regulation is observed in the CA1 hippocampal subfield but not in CA3 and is thus subfield/celltype-specific. Moreover, alternative splicing of the flip/flop cassette downstream of the R/G site is closely linked to the editing state, which is regulated by Ca(2+). Our data show that A-to-I RNA editing has the capacity to tune protein function in response to external stimuli. Oxford University Press 2013-01 2012-11-20 /pmc/articles/PMC3553983/ /pubmed/23172290 http://dx.doi.org/10.1093/nar/gks1045 Text en © The Author(s) 2012. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/3.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/3.0/), which permits non-commercial reuse, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com. |
spellingShingle | RNA Balik, Ales Penn, Andrew C. Nemoda, Zsofia Greger, Ingo H. Activity-regulated RNA editing in select neuronal subfields in hippocampus |
title | Activity-regulated RNA editing in select neuronal subfields in hippocampus |
title_full | Activity-regulated RNA editing in select neuronal subfields in hippocampus |
title_fullStr | Activity-regulated RNA editing in select neuronal subfields in hippocampus |
title_full_unstemmed | Activity-regulated RNA editing in select neuronal subfields in hippocampus |
title_short | Activity-regulated RNA editing in select neuronal subfields in hippocampus |
title_sort | activity-regulated rna editing in select neuronal subfields in hippocampus |
topic | RNA |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3553983/ https://www.ncbi.nlm.nih.gov/pubmed/23172290 http://dx.doi.org/10.1093/nar/gks1045 |
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