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Complete genome sequence of Thauera aminoaromatica strain MZ1T
Thauera aminoaromatica strain MZ1T, an isolate belonging to genus Thauera, of the family Rhodocyclaceae and the class the Betaproteobacteria, has been characterized for its ability to produce abundant exopolysaccharide and degrade various aromatic compounds with nitrate as an electron acceptor. Thes...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Michigan State University
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3558969/ https://www.ncbi.nlm.nih.gov/pubmed/23407619 http://dx.doi.org/10.4056/sigs.2696029 |
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author | Jiang, Ke Sanseverino, John Chauhan, Archana Lucas, Susan Copeland, Alex Lapidus, Alla Del Rio, Tijana Glavina Dalin, Eileen Tice, Hope Bruce, David Goodwin, Lynne Pitluck, Sam Sims, David Brettin, Thomas Detter, John C. Han, Cliff Chang, Y.J. Larimer, Frank Land, Miriam Hauser, Loren Kyrpides, Nikos C. Mikhailova, Natalia Moser, Scott Jegier, Patricia Close, Dan DeBruyn, Jennifer M. Wang, Ying Layton, Alice C. Allen, Michael S. Sayler, Gary S. |
author_facet | Jiang, Ke Sanseverino, John Chauhan, Archana Lucas, Susan Copeland, Alex Lapidus, Alla Del Rio, Tijana Glavina Dalin, Eileen Tice, Hope Bruce, David Goodwin, Lynne Pitluck, Sam Sims, David Brettin, Thomas Detter, John C. Han, Cliff Chang, Y.J. Larimer, Frank Land, Miriam Hauser, Loren Kyrpides, Nikos C. Mikhailova, Natalia Moser, Scott Jegier, Patricia Close, Dan DeBruyn, Jennifer M. Wang, Ying Layton, Alice C. Allen, Michael S. Sayler, Gary S. |
author_sort | Jiang, Ke |
collection | PubMed |
description | Thauera aminoaromatica strain MZ1T, an isolate belonging to genus Thauera, of the family Rhodocyclaceae and the class the Betaproteobacteria, has been characterized for its ability to produce abundant exopolysaccharide and degrade various aromatic compounds with nitrate as an electron acceptor. These properties, if fully understood at the genome-sequence level, can aid in environmental processing of organic matter in anaerobic cycles by short-circuiting a central anaerobic metabolite, acetate, from microbiological conversion to methane, a critical greenhouse gas. Strain MZ1T is the first strain from the genus Thauera with a completely sequenced genome. The 4,496,212 bp chromosome and 78,374 bp plasmid contain 4,071 protein-coding and 71 RNA genes, and were sequenced as part of the DOE Community Sequencing Program CSP_776774. |
format | Online Article Text |
id | pubmed-3558969 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Michigan State University |
record_format | MEDLINE/PubMed |
spelling | pubmed-35589692013-02-13 Complete genome sequence of Thauera aminoaromatica strain MZ1T Jiang, Ke Sanseverino, John Chauhan, Archana Lucas, Susan Copeland, Alex Lapidus, Alla Del Rio, Tijana Glavina Dalin, Eileen Tice, Hope Bruce, David Goodwin, Lynne Pitluck, Sam Sims, David Brettin, Thomas Detter, John C. Han, Cliff Chang, Y.J. Larimer, Frank Land, Miriam Hauser, Loren Kyrpides, Nikos C. Mikhailova, Natalia Moser, Scott Jegier, Patricia Close, Dan DeBruyn, Jennifer M. Wang, Ying Layton, Alice C. Allen, Michael S. Sayler, Gary S. Stand Genomic Sci Short Genome Reports Thauera aminoaromatica strain MZ1T, an isolate belonging to genus Thauera, of the family Rhodocyclaceae and the class the Betaproteobacteria, has been characterized for its ability to produce abundant exopolysaccharide and degrade various aromatic compounds with nitrate as an electron acceptor. These properties, if fully understood at the genome-sequence level, can aid in environmental processing of organic matter in anaerobic cycles by short-circuiting a central anaerobic metabolite, acetate, from microbiological conversion to methane, a critical greenhouse gas. Strain MZ1T is the first strain from the genus Thauera with a completely sequenced genome. The 4,496,212 bp chromosome and 78,374 bp plasmid contain 4,071 protein-coding and 71 RNA genes, and were sequenced as part of the DOE Community Sequencing Program CSP_776774. Michigan State University 2012-07-20 /pmc/articles/PMC3558969/ /pubmed/23407619 http://dx.doi.org/10.4056/sigs.2696029 Text en Copyright © retained by original authors. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Genome Reports Jiang, Ke Sanseverino, John Chauhan, Archana Lucas, Susan Copeland, Alex Lapidus, Alla Del Rio, Tijana Glavina Dalin, Eileen Tice, Hope Bruce, David Goodwin, Lynne Pitluck, Sam Sims, David Brettin, Thomas Detter, John C. Han, Cliff Chang, Y.J. Larimer, Frank Land, Miriam Hauser, Loren Kyrpides, Nikos C. Mikhailova, Natalia Moser, Scott Jegier, Patricia Close, Dan DeBruyn, Jennifer M. Wang, Ying Layton, Alice C. Allen, Michael S. Sayler, Gary S. Complete genome sequence of Thauera aminoaromatica strain MZ1T |
title | Complete genome sequence of Thauera aminoaromatica strain MZ1T |
title_full | Complete genome sequence of Thauera aminoaromatica strain MZ1T |
title_fullStr | Complete genome sequence of Thauera aminoaromatica strain MZ1T |
title_full_unstemmed | Complete genome sequence of Thauera aminoaromatica strain MZ1T |
title_short | Complete genome sequence of Thauera aminoaromatica strain MZ1T |
title_sort | complete genome sequence of thauera aminoaromatica strain mz1t |
topic | Short Genome Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3558969/ https://www.ncbi.nlm.nih.gov/pubmed/23407619 http://dx.doi.org/10.4056/sigs.2696029 |
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