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Complete genome sequence of Thauera aminoaromatica strain MZ1T

Thauera aminoaromatica strain MZ1T, an isolate belonging to genus Thauera, of the family Rhodocyclaceae and the class the Betaproteobacteria, has been characterized for its ability to produce abundant exopolysaccharide and degrade various aromatic compounds with nitrate as an electron acceptor. Thes...

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Autores principales: Jiang, Ke, Sanseverino, John, Chauhan, Archana, Lucas, Susan, Copeland, Alex, Lapidus, Alla, Del Rio, Tijana Glavina, Dalin, Eileen, Tice, Hope, Bruce, David, Goodwin, Lynne, Pitluck, Sam, Sims, David, Brettin, Thomas, Detter, John C., Han, Cliff, Chang, Y.J., Larimer, Frank, Land, Miriam, Hauser, Loren, Kyrpides, Nikos C., Mikhailova, Natalia, Moser, Scott, Jegier, Patricia, Close, Dan, DeBruyn, Jennifer M., Wang, Ying, Layton, Alice C., Allen, Michael S., Sayler, Gary S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Michigan State University 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3558969/
https://www.ncbi.nlm.nih.gov/pubmed/23407619
http://dx.doi.org/10.4056/sigs.2696029
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author Jiang, Ke
Sanseverino, John
Chauhan, Archana
Lucas, Susan
Copeland, Alex
Lapidus, Alla
Del Rio, Tijana Glavina
Dalin, Eileen
Tice, Hope
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Sims, David
Brettin, Thomas
Detter, John C.
Han, Cliff
Chang, Y.J.
Larimer, Frank
Land, Miriam
Hauser, Loren
Kyrpides, Nikos C.
Mikhailova, Natalia
Moser, Scott
Jegier, Patricia
Close, Dan
DeBruyn, Jennifer M.
Wang, Ying
Layton, Alice C.
Allen, Michael S.
Sayler, Gary S.
author_facet Jiang, Ke
Sanseverino, John
Chauhan, Archana
Lucas, Susan
Copeland, Alex
Lapidus, Alla
Del Rio, Tijana Glavina
Dalin, Eileen
Tice, Hope
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Sims, David
Brettin, Thomas
Detter, John C.
Han, Cliff
Chang, Y.J.
Larimer, Frank
Land, Miriam
Hauser, Loren
Kyrpides, Nikos C.
Mikhailova, Natalia
Moser, Scott
Jegier, Patricia
Close, Dan
DeBruyn, Jennifer M.
Wang, Ying
Layton, Alice C.
Allen, Michael S.
Sayler, Gary S.
author_sort Jiang, Ke
collection PubMed
description Thauera aminoaromatica strain MZ1T, an isolate belonging to genus Thauera, of the family Rhodocyclaceae and the class the Betaproteobacteria, has been characterized for its ability to produce abundant exopolysaccharide and degrade various aromatic compounds with nitrate as an electron acceptor. These properties, if fully understood at the genome-sequence level, can aid in environmental processing of organic matter in anaerobic cycles by short-circuiting a central anaerobic metabolite, acetate, from microbiological conversion to methane, a critical greenhouse gas. Strain MZ1T is the first strain from the genus Thauera with a completely sequenced genome. The 4,496,212 bp chromosome and 78,374 bp plasmid contain 4,071 protein-coding and 71 RNA genes, and were sequenced as part of the DOE Community Sequencing Program CSP_776774.
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spelling pubmed-35589692013-02-13 Complete genome sequence of Thauera aminoaromatica strain MZ1T Jiang, Ke Sanseverino, John Chauhan, Archana Lucas, Susan Copeland, Alex Lapidus, Alla Del Rio, Tijana Glavina Dalin, Eileen Tice, Hope Bruce, David Goodwin, Lynne Pitluck, Sam Sims, David Brettin, Thomas Detter, John C. Han, Cliff Chang, Y.J. Larimer, Frank Land, Miriam Hauser, Loren Kyrpides, Nikos C. Mikhailova, Natalia Moser, Scott Jegier, Patricia Close, Dan DeBruyn, Jennifer M. Wang, Ying Layton, Alice C. Allen, Michael S. Sayler, Gary S. Stand Genomic Sci Short Genome Reports Thauera aminoaromatica strain MZ1T, an isolate belonging to genus Thauera, of the family Rhodocyclaceae and the class the Betaproteobacteria, has been characterized for its ability to produce abundant exopolysaccharide and degrade various aromatic compounds with nitrate as an electron acceptor. These properties, if fully understood at the genome-sequence level, can aid in environmental processing of organic matter in anaerobic cycles by short-circuiting a central anaerobic metabolite, acetate, from microbiological conversion to methane, a critical greenhouse gas. Strain MZ1T is the first strain from the genus Thauera with a completely sequenced genome. The 4,496,212 bp chromosome and 78,374 bp plasmid contain 4,071 protein-coding and 71 RNA genes, and were sequenced as part of the DOE Community Sequencing Program CSP_776774. Michigan State University 2012-07-20 /pmc/articles/PMC3558969/ /pubmed/23407619 http://dx.doi.org/10.4056/sigs.2696029 Text en Copyright © retained by original authors. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Jiang, Ke
Sanseverino, John
Chauhan, Archana
Lucas, Susan
Copeland, Alex
Lapidus, Alla
Del Rio, Tijana Glavina
Dalin, Eileen
Tice, Hope
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Sims, David
Brettin, Thomas
Detter, John C.
Han, Cliff
Chang, Y.J.
Larimer, Frank
Land, Miriam
Hauser, Loren
Kyrpides, Nikos C.
Mikhailova, Natalia
Moser, Scott
Jegier, Patricia
Close, Dan
DeBruyn, Jennifer M.
Wang, Ying
Layton, Alice C.
Allen, Michael S.
Sayler, Gary S.
Complete genome sequence of Thauera aminoaromatica strain MZ1T
title Complete genome sequence of Thauera aminoaromatica strain MZ1T
title_full Complete genome sequence of Thauera aminoaromatica strain MZ1T
title_fullStr Complete genome sequence of Thauera aminoaromatica strain MZ1T
title_full_unstemmed Complete genome sequence of Thauera aminoaromatica strain MZ1T
title_short Complete genome sequence of Thauera aminoaromatica strain MZ1T
title_sort complete genome sequence of thauera aminoaromatica strain mz1t
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3558969/
https://www.ncbi.nlm.nih.gov/pubmed/23407619
http://dx.doi.org/10.4056/sigs.2696029
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