Cargando…
TEAK: Topology Enrichment Analysis frameworK for detecting activated biological subpathways
To mine gene expression data sets effectively, analysis frameworks need to incorporate methods that identify intergenic relationships within enriched biologically relevant subpathways. For this purpose, we developed the Topology Enrichment Analysis frameworK (TEAK). TEAK employs a novel in-house alg...
Autores principales: | Judeh, Thair, Johnson, Cole, Kumar, Anuj, Zhu, Dongxiao |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2013
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3561980/ https://www.ncbi.nlm.nih.gov/pubmed/23268448 http://dx.doi.org/10.1093/nar/gks1299 |
Ejemplares similares
-
Subpathway-GM: identification of metabolic subpathways via joint power of interesting genes and metabolites and their topologies within pathways
por: Li, Chunquan, et al.
Publicado: (2013) -
ce‐Subpathway: Identification of ceRNA‐mediated subpathways via joint power of ceRNAs and pathway topologies
por: Feng, Chenchen, et al.
Publicado: (2018) -
Subpathway-GMir: identifying miRNA-mediated metabolic subpathways by integrating condition-specific genes, microRNAs, and pathway topologies
por: Feng, Li, et al.
Publicado: (2015) -
Subpathway-CorSP: Identification of metabolic subpathways via integrating expression correlations and topological features between metabolites and genes of interest within pathways
por: Feng, Chenchen, et al.
Publicado: (2016) -
ATRX and RECQ5 define distinct homologous recombination subpathways
por: Elbakry, Amira, et al.
Publicado: (2021)