Cargando…
A population model for genotyping indels from next-generation sequence data
Insertion and deletion polymorphisms (indels) are an important source of genomic variation in plant and animal genomes, but accurate genotyping from low-coverage and exome next-generation sequence data remains challenging. We introduce an efficient population clustering algorithm for diploids and po...
Autores principales: | Shao, Haojing, Bellos, Evangelos, Yin, Hanjiudai, Liu, Xiao, Zou, Jing, Li, Yingrui, Wang, Jun, Coin, Lachlan J. M. |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2013
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3562001/ https://www.ncbi.nlm.nih.gov/pubmed/23221639 http://dx.doi.org/10.1093/nar/gks1143 |
Ejemplares similares
-
cnvHiTSeq: integrative models for high-resolution copy number variation detection and genotyping using population sequencing data
por: Bellos, Evangelos, et al.
Publicado: (2012) -
sCNAphase: using haplotype resolved read depth to genotype somatic copy number alterations from low cellularity aneuploid tumors
por: Chen, Wenhan, et al.
Publicado: (2017) -
T-lex2: genotyping, frequency estimation and re-annotation of transposable elements using single or pooled next-generation sequencing data
por: Fiston-Lavier, Anna-Sophie, et al.
Publicado: (2015) -
cnvCapSeq: detecting copy number variation in long-range targeted resequencing data
por: Bellos, Evangelos, et al.
Publicado: (2014) -
Efficiently identifying genome-wide changes with next-generation sequencing data
por: Huang, Weichun, et al.
Publicado: (2011)