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READSCAN: a fast and scalable pathogen discovery program with accurate genome relative abundance estimation

Summary: READSCAN is a highly scalable parallel program to identify non-host sequences (of potential pathogen origin) and estimate their genome relative abundance in high-throughput sequence datasets. READSCAN accurately classified human and viral sequences on a 20.1 million reads simulated dataset...

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Detalles Bibliográficos
Autores principales:	Naeem, Raeece, Rashid, Mamoon, Pain, Arnab
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2013
Materias:	Applications Notes
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3562070/ https://www.ncbi.nlm.nih.gov/pubmed/23193222 http://dx.doi.org/10.1093/bioinformatics/bts684

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