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Computational classification of mitochondrial shapes reflects stress and redox state

Dynamic variations in mitochondrial shape have been related to function. However, tools to automatically classify and enumerate mitochondrial shapes are lacking, as are systematic studies exploring the relationship of such shapes to mitochondrial stress. Here we show that during increased generation...

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Autores principales: Ahmad, T, Aggarwal, K, Pattnaik, B, Mukherjee, S, Sethi, T, Tiwari, B K, Kumar, M, Micheal, A, Mabalirajan, U, Ghosh, B, Sinha Roy, S, Agrawal, A
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3564000/
https://www.ncbi.nlm.nih.gov/pubmed/23328668
http://dx.doi.org/10.1038/cddis.2012.213
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author Ahmad, T
Aggarwal, K
Pattnaik, B
Mukherjee, S
Sethi, T
Tiwari, B K
Kumar, M
Micheal, A
Mabalirajan, U
Ghosh, B
Sinha Roy, S
Agrawal, A
author_facet Ahmad, T
Aggarwal, K
Pattnaik, B
Mukherjee, S
Sethi, T
Tiwari, B K
Kumar, M
Micheal, A
Mabalirajan, U
Ghosh, B
Sinha Roy, S
Agrawal, A
author_sort Ahmad, T
collection PubMed
description Dynamic variations in mitochondrial shape have been related to function. However, tools to automatically classify and enumerate mitochondrial shapes are lacking, as are systematic studies exploring the relationship of such shapes to mitochondrial stress. Here we show that during increased generation of mitochondrial reactive oxygen species (mtROS), mitochondria change their shape from tubular to donut or blob forms, which can be computationally quantified. Imaging of cells treated with rotenone or antimycin, showed time and dose-dependent conversion of tubular forms to donut-shaped mitochondria followed by appearance of blob forms. Time-lapse images showed reversible transitions from tubular to donut shapes and unidirectional transitions between donut and blob shapes. Blobs were the predominant sources of mtROS and appeared to be related to mitochondrial-calcium influx. Mitochondrial shape change could be prevented by either pretreatment with antioxidants like N-acetyl cysteine or inhibition of the mitochondrial calcium uniporter. This work represents a novel approach towards relating mitochondrial shape to function, through integration of cellular markers and a novel shape classification algorithm.
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spelling pubmed-35640002013-02-05 Computational classification of mitochondrial shapes reflects stress and redox state Ahmad, T Aggarwal, K Pattnaik, B Mukherjee, S Sethi, T Tiwari, B K Kumar, M Micheal, A Mabalirajan, U Ghosh, B Sinha Roy, S Agrawal, A Cell Death Dis Original Article Dynamic variations in mitochondrial shape have been related to function. However, tools to automatically classify and enumerate mitochondrial shapes are lacking, as are systematic studies exploring the relationship of such shapes to mitochondrial stress. Here we show that during increased generation of mitochondrial reactive oxygen species (mtROS), mitochondria change their shape from tubular to donut or blob forms, which can be computationally quantified. Imaging of cells treated with rotenone or antimycin, showed time and dose-dependent conversion of tubular forms to donut-shaped mitochondria followed by appearance of blob forms. Time-lapse images showed reversible transitions from tubular to donut shapes and unidirectional transitions between donut and blob shapes. Blobs were the predominant sources of mtROS and appeared to be related to mitochondrial-calcium influx. Mitochondrial shape change could be prevented by either pretreatment with antioxidants like N-acetyl cysteine or inhibition of the mitochondrial calcium uniporter. This work represents a novel approach towards relating mitochondrial shape to function, through integration of cellular markers and a novel shape classification algorithm. Nature Publishing Group 2013-01 2013-01-17 /pmc/articles/PMC3564000/ /pubmed/23328668 http://dx.doi.org/10.1038/cddis.2012.213 Text en Copyright © 2013 Macmillan Publishers Limited http://creativecommons.org/licenses/by-nc-nd/3.0/ This work is licensed under the Creative Commons Attribution-NonCommercial-No Derivative Works 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/3.0/
spellingShingle Original Article
Ahmad, T
Aggarwal, K
Pattnaik, B
Mukherjee, S
Sethi, T
Tiwari, B K
Kumar, M
Micheal, A
Mabalirajan, U
Ghosh, B
Sinha Roy, S
Agrawal, A
Computational classification of mitochondrial shapes reflects stress and redox state
title Computational classification of mitochondrial shapes reflects stress and redox state
title_full Computational classification of mitochondrial shapes reflects stress and redox state
title_fullStr Computational classification of mitochondrial shapes reflects stress and redox state
title_full_unstemmed Computational classification of mitochondrial shapes reflects stress and redox state
title_short Computational classification of mitochondrial shapes reflects stress and redox state
title_sort computational classification of mitochondrial shapes reflects stress and redox state
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3564000/
https://www.ncbi.nlm.nih.gov/pubmed/23328668
http://dx.doi.org/10.1038/cddis.2012.213
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