Cargando…

Quantitative biomedical annotation using medical subject heading over-representation profiles (MeSHOPs)

BACKGROUND: MEDLINE®/PubMed® indexes over 20 million biomedical articles, providing curated annotation of its contents using a controlled vocabulary known as Medical Subject Headings (MeSH). The MeSH vocabulary, developed over 50+ years, provides a broad coverage of topics across biomedical research...

Descripción completa

Detalles Bibliográficos
Autores principales:	Cheung, Warren A, Ouellette, BF Francis, Wasserman, Wyeth W
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2012
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3564935/ https://www.ncbi.nlm.nih.gov/pubmed/23017167 http://dx.doi.org/10.1186/1471-2105-13-249

Ejemplares similares

Compensating for literature annotation bias when predicting novel drug-disease relationships through Medical Subject Heading Over-representation Profile (MeSHOP) similarity
por: Cheung, Warren A, et al.
Publicado: (2013)

Inferring novel gene-disease associations using Medical Subject Heading Over-representation Profiles
por: Cheung, Warren A, et al.
Publicado: (2012)

Medical Subject Heading (MeSH) annotations illuminate maize genetics and evolution
por: Beissinger, Timothy M., et al.
Publicado: (2017)

Recommending MeSH terms for annotating biomedical articles
por: Huang, Minlie, et al.
Publicado: (2011)

oPOSSUM: integrated tools for analysis of regulatory motif over-representation
por: Ho Sui, Shannan J., et al.
Publicado: (2007)

Gene Characterization Index: Assessing the Depth of Gene Annotation
por: Kemmer, Danielle, et al.
Publicado: (2008)

oPOSSUM-3: Advanced Analysis of Regulatory Motif Over-Representation Across Genes or ChIP-Seq Datasets
por: Kwon, Andrew T., et al.
Publicado: (2012)

Annotations: The Slaughter of Shop-Assistants.—The State and the Shop.—Washing Bills: A Suggestion
Publicado: (1888)

COEXPEDIA: exploring biomedical hypotheses via co-expressions associated with medical subject headings (MeSH)
por: Yang, Sunmo, et al.
Publicado: (2017)

Automated MeSH Indexing of Biomedical Literature Using Contextualized Word Representations
por: Koutsomitropoulos, Dimitrios A., et al.
Publicado: (2020)

Mapping the biomedical sciences using Medical Subject Headings: a comparison between MeSH co-assignments and MeSH citation pairs
por: Shu, Fei, et al.
Publicado: (2021)

Methods of teaching shop and technical subjects /
por: Leighbody, Gerald B.
Publicado: (1968)

Two Similarity Metrics for Medical Subject Headings (MeSH):: An Aid to Biomedical Text Mining and Author Name Disambiguation
por: Smalheiser, Neil R., et al.
Publicado: (2016)

Cited references and Medical Subject Headings (MeSH) as two different knowledge representations: clustering and mappings at the paper level
por: Leydesdorff, Loet, et al.
Publicado: (2016)

Medical subject headings (MeSH) terms
por: Dhammi, Ish Kumar, et al.
Publicado: (2014)

GNOMICS: A one-stop shop for biomedical and genomic data
por: Kronk, Charles J., et al.
Publicado: (2018)

Ulysses - an application for the projection of molecular interactions across species
por: Kemmer, Danielle, et al.
Publicado: (2005)

MeSH ORA framework: R/Bioconductor packages to support MeSH over-representation analysis
por: Tsuyuzaki, Koki, et al.
Publicado: (2015)

The Open Biomedical Annotator
por: Jonquet, Clement, et al.
Publicado: (2009)

Ranking Biomedical Annotations with Annotator's Semantic Relevancy
por: Wu, Aihua
Publicado: (2014)

Text-based over-representation analysis of microarray gene lists with annotation bias
por: Leong, Hui Sun, et al.
Publicado: (2009)

Functional gene clustering via gene annotation sentences, MeSH and GO keywords from biomedical literature
por: Natarajan, Jeyakumar, et al.
Publicado: (2007)

ShapeShop: Towards Understanding Deep Learning Representations via Interactive Experimentation
por: Hohman, Fred, et al.
Publicado: (2017)

PAZAR: a framework for collection and dissemination of cis-regulatory sequence annotation
por: Portales-Casamar, Elodie, et al.
Publicado: (2007)

Annotating the biomedical literature for the human variome
por: Verspoor, Karin, et al.
Publicado: (2013)

Just Love Me, Feed Me, Never Leave Me: Understanding Pet Food Anxiety, Feeding and Shopping Behavior of US Pet Owners in Covidian Times
por: Rombach, Meike, et al.
Publicado: (2021)

Shop!
Publicado: (1974)

Scalable representations of diseases in biomedical ontologies
por: Schulz, Stefan, et al.
Publicado: (2011)

Developing a Biomedical Expert Finding System Using Medical Subject Headings
por: Singh, Harpreet, et al.
Publicado: (2013)

Biomedical Insights That Inform the Diagnosis of ME/CFS
por: Lidbury, Brett A., et al.
Publicado: (2020)

Discovering gene annotations in biomedical text databases
por: Cakmak, Ali, et al.
Publicado: (2008)

GOTA: GO term annotation of biomedical literature
por: Lena, Pietro Di, et al.
Publicado: (2015)

Gene annotation bias impedes biomedical research
por: Haynes, Winston A., et al.
Publicado: (2018)

Configurable web-services for biomedical document annotation
por: Matos, Sérgio
Publicado: (2018)

Biomedical articles share annotations with their citation neighbors
por: Rodriguez-Esteban, Raul
Publicado: (2021)

Standardization of assay representation in the Ontology for Biomedical Investigations
por: Vita, Randi, et al.
Publicado: (2021)

Semantic Annotation, Representation and Linking of Survey Data
por: Bensmann, Felix, et al.
Publicado: (2020)

Window shopping
Publicado: (1987)

The State and the Shop
Publicado: (1892)

Trading and Shopping
Publicado: (1869)

Cannot write session to /tmp/vufind_sessions/sess_b88s78o0jugn3q0pp5sho0ab9d