Whole Genome Sequencing of Thermus oshimai JL-2 and Thermus thermophilus JL-18, Incomplete Denitrifiers from the United States Great Basin

The strains Thermus oshimai JL-2 and Thermus thermophilus JL-18 each have a circular chromosome, 2.07 Mb and 1.9 Mb in size, respectively, and each has two plasmids ranging from 0.27 Mb to 57.2 kb. The megaplasmid of each strain contains a gene cluster for the reduction of nitrate to nitrous oxide,...

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Autores principales: Murugapiran, Senthil K., Huntemann, Marcel, Wei, Chia-Lin, Han, James, Detter, John C., Han, Cliff S., Erkkila, Tracy H., Teshima, Hazuki, Chen, Amy, Kyrpides, Nikos, Mavrommatis, Konstantinos, Markowitz, Victor, Szeto, Ernest, Ivanova, Natalia, Pagani, Ioanna, Lam, Jenny, McDonald, Austin I., Dodsworth, Jeremy A., Pati, Amrita, Goodwin, Lynne, Peters, Lin, Pitluck, Sam, Woyke, Tanja, Hedlund, Brian P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2013
Materias:
Prokaryotes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3569359/
https://www.ncbi.nlm.nih.gov/pubmed/23405355
http://dx.doi.org/10.1128/genomeA.00106-12
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author Murugapiran, Senthil K.
Huntemann, Marcel
Wei, Chia-Lin
Han, James
Detter, John C.
Han, Cliff S.
Erkkila, Tracy H.
Teshima, Hazuki
Chen, Amy
Kyrpides, Nikos
Mavrommatis, Konstantinos
Markowitz, Victor
Szeto, Ernest
Ivanova, Natalia
Pagani, Ioanna
Lam, Jenny
McDonald, Austin I.
Dodsworth, Jeremy A.
Pati, Amrita
Goodwin, Lynne
Peters, Lin
Pitluck, Sam
Woyke, Tanja
Hedlund, Brian P.
author_facet Murugapiran, Senthil K.
Huntemann, Marcel
Wei, Chia-Lin
Han, James
Detter, John C.
Han, Cliff S.
Erkkila, Tracy H.
Teshima, Hazuki
Chen, Amy
Kyrpides, Nikos
Mavrommatis, Konstantinos
Markowitz, Victor
Szeto, Ernest
Ivanova, Natalia
Pagani, Ioanna
Lam, Jenny
McDonald, Austin I.
Dodsworth, Jeremy A.
Pati, Amrita
Goodwin, Lynne
Peters, Lin
Pitluck, Sam
Woyke, Tanja
Hedlund, Brian P.
author_sort Murugapiran, Senthil K.
collection PubMed
description The strains Thermus oshimai JL-2 and Thermus thermophilus JL-18 each have a circular chromosome, 2.07 Mb and 1.9 Mb in size, respectively, and each has two plasmids ranging from 0.27 Mb to 57.2 kb. The megaplasmid of each strain contains a gene cluster for the reduction of nitrate to nitrous oxide, consistent with their incomplete denitrification phenotypes.
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spelling pubmed-35693592013-02-12 Whole Genome Sequencing of Thermus oshimai JL-2 and Thermus thermophilus JL-18, Incomplete Denitrifiers from the United States Great Basin Murugapiran, Senthil K. Huntemann, Marcel Wei, Chia-Lin Han, James Detter, John C. Han, Cliff S. Erkkila, Tracy H. Teshima, Hazuki Chen, Amy Kyrpides, Nikos Mavrommatis, Konstantinos Markowitz, Victor Szeto, Ernest Ivanova, Natalia Pagani, Ioanna Lam, Jenny McDonald, Austin I. Dodsworth, Jeremy A. Pati, Amrita Goodwin, Lynne Peters, Lin Pitluck, Sam Woyke, Tanja Hedlund, Brian P. Genome Announc Prokaryotes The strains Thermus oshimai JL-2 and Thermus thermophilus JL-18 each have a circular chromosome, 2.07 Mb and 1.9 Mb in size, respectively, and each has two plasmids ranging from 0.27 Mb to 57.2 kb. The megaplasmid of each strain contains a gene cluster for the reduction of nitrate to nitrous oxide, consistent with their incomplete denitrification phenotypes. American Society for Microbiology 2013-01-24 /pmc/articles/PMC3569359/ /pubmed/23405355 http://dx.doi.org/10.1128/genomeA.00106-12 Text en Copyright © 2013 Murugapiran et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 3.0 Unported license (http://creativecommons.org/licenses/by/3.0/) .
spellingShingle Prokaryotes
Murugapiran, Senthil K.
Huntemann, Marcel
Wei, Chia-Lin
Han, James
Detter, John C.
Han, Cliff S.
Erkkila, Tracy H.
Teshima, Hazuki
Chen, Amy
Kyrpides, Nikos
Mavrommatis, Konstantinos
Markowitz, Victor
Szeto, Ernest
Ivanova, Natalia
Pagani, Ioanna
Lam, Jenny
McDonald, Austin I.
Dodsworth, Jeremy A.
Pati, Amrita
Goodwin, Lynne
Peters, Lin
Pitluck, Sam
Woyke, Tanja
Hedlund, Brian P.
Whole Genome Sequencing of Thermus oshimai JL-2 and Thermus thermophilus JL-18, Incomplete Denitrifiers from the United States Great Basin
title Whole Genome Sequencing of Thermus oshimai JL-2 and Thermus thermophilus JL-18, Incomplete Denitrifiers from the United States Great Basin
title_full Whole Genome Sequencing of Thermus oshimai JL-2 and Thermus thermophilus JL-18, Incomplete Denitrifiers from the United States Great Basin
title_fullStr Whole Genome Sequencing of Thermus oshimai JL-2 and Thermus thermophilus JL-18, Incomplete Denitrifiers from the United States Great Basin
title_full_unstemmed Whole Genome Sequencing of Thermus oshimai JL-2 and Thermus thermophilus JL-18, Incomplete Denitrifiers from the United States Great Basin
title_short Whole Genome Sequencing of Thermus oshimai JL-2 and Thermus thermophilus JL-18, Incomplete Denitrifiers from the United States Great Basin
title_sort whole genome sequencing of thermus oshimai jl-2 and thermus thermophilus jl-18, incomplete denitrifiers from the united states great basin
topic Prokaryotes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3569359/
https://www.ncbi.nlm.nih.gov/pubmed/23405355
http://dx.doi.org/10.1128/genomeA.00106-12
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