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Complete genome sequence of the sulfate-reducing firmicute Desulfotomaculum ruminis type strain (DL(T))
Desulfotomaculum ruminis Campbell and Postgate 1965 is a member of the large genus Desulfotomaculum which contains 30 species and is contained in the family Peptococcaceae. This species is of interest because it represents one of the few sulfate-reducing bacteria that have been isolated from the rum...
| Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
Michigan State University
2012
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3569383/ https://www.ncbi.nlm.nih.gov/pubmed/23408247 http://dx.doi.org/10.4056/sigs.3226659 |
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| author | Spring, Stefan Visser, Michael Lu, Megan Copeland, Alex Lapidus, Alla Lucas, Susan Cheng, Jan-Fang Han, Cliff Tapia, Roxanne Goodwin, Lynne A. Pitluck, Sam Ivanova, Natalia Land, Miriam Hauser, Loren Larimer, Frank Rohde, Manfred Göker, Markus Detter, John C. Kyrpides, Nikos C. Woyke, Tanja Schaap, Peter J. Plugge, Caroline M. Muyzer, Gerard Kuever, Jan Pereira, Inês A. C. Parshina, Sofiya N. Bernier-Latmani, Rizlan Stams, Alfons J.M. Klenk, Hans-Peter |
| author_facet | Spring, Stefan Visser, Michael Lu, Megan Copeland, Alex Lapidus, Alla Lucas, Susan Cheng, Jan-Fang Han, Cliff Tapia, Roxanne Goodwin, Lynne A. Pitluck, Sam Ivanova, Natalia Land, Miriam Hauser, Loren Larimer, Frank Rohde, Manfred Göker, Markus Detter, John C. Kyrpides, Nikos C. Woyke, Tanja Schaap, Peter J. Plugge, Caroline M. Muyzer, Gerard Kuever, Jan Pereira, Inês A. C. Parshina, Sofiya N. Bernier-Latmani, Rizlan Stams, Alfons J.M. Klenk, Hans-Peter |
| author_sort | Spring, Stefan |
| collection | PubMed |
| description | Desulfotomaculum ruminis Campbell and Postgate 1965 is a member of the large genus Desulfotomaculum which contains 30 species and is contained in the family Peptococcaceae. This species is of interest because it represents one of the few sulfate-reducing bacteria that have been isolated from the rumen. Here we describe the features of D. ruminis together with the complete genome sequence and annotation. The 3,969,014 bp long chromosome with a total of 3,901 protein-coding and 85 RNA genes is the second completed genome sequence of a type strain of the genus Desulfotomaculum to be published, and was sequenced as part of the DOE Joint Genome Institute Community Sequencing Program 2009. |
| format | Online Article Text |
| id | pubmed-3569383 |
| institution | National Center for Biotechnology Information |
| language | English |
| publishDate | 2012 |
| publisher | Michigan State University |
| record_format | MEDLINE/PubMed |
| spelling | pubmed-35693832013-02-13 Complete genome sequence of the sulfate-reducing firmicute Desulfotomaculum ruminis type strain (DL(T)) Spring, Stefan Visser, Michael Lu, Megan Copeland, Alex Lapidus, Alla Lucas, Susan Cheng, Jan-Fang Han, Cliff Tapia, Roxanne Goodwin, Lynne A. Pitluck, Sam Ivanova, Natalia Land, Miriam Hauser, Loren Larimer, Frank Rohde, Manfred Göker, Markus Detter, John C. Kyrpides, Nikos C. Woyke, Tanja Schaap, Peter J. Plugge, Caroline M. Muyzer, Gerard Kuever, Jan Pereira, Inês A. C. Parshina, Sofiya N. Bernier-Latmani, Rizlan Stams, Alfons J.M. Klenk, Hans-Peter Stand Genomic Sci Short Genome Reports Desulfotomaculum ruminis Campbell and Postgate 1965 is a member of the large genus Desulfotomaculum which contains 30 species and is contained in the family Peptococcaceae. This species is of interest because it represents one of the few sulfate-reducing bacteria that have been isolated from the rumen. Here we describe the features of D. ruminis together with the complete genome sequence and annotation. The 3,969,014 bp long chromosome with a total of 3,901 protein-coding and 85 RNA genes is the second completed genome sequence of a type strain of the genus Desulfotomaculum to be published, and was sequenced as part of the DOE Joint Genome Institute Community Sequencing Program 2009. Michigan State University 2012-12-11 /pmc/articles/PMC3569383/ /pubmed/23408247 http://dx.doi.org/10.4056/sigs.3226659 Text en Copyright © retained by original authors. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
| spellingShingle | Short Genome Reports Spring, Stefan Visser, Michael Lu, Megan Copeland, Alex Lapidus, Alla Lucas, Susan Cheng, Jan-Fang Han, Cliff Tapia, Roxanne Goodwin, Lynne A. Pitluck, Sam Ivanova, Natalia Land, Miriam Hauser, Loren Larimer, Frank Rohde, Manfred Göker, Markus Detter, John C. Kyrpides, Nikos C. Woyke, Tanja Schaap, Peter J. Plugge, Caroline M. Muyzer, Gerard Kuever, Jan Pereira, Inês A. C. Parshina, Sofiya N. Bernier-Latmani, Rizlan Stams, Alfons J.M. Klenk, Hans-Peter Complete genome sequence of the sulfate-reducing firmicute Desulfotomaculum ruminis type strain (DL(T)) |
| title | Complete genome sequence of the sulfate-reducing firmicute Desulfotomaculum ruminis type strain (DL(T)) |
| title_full | Complete genome sequence of the sulfate-reducing firmicute Desulfotomaculum ruminis type strain (DL(T)) |
| title_fullStr | Complete genome sequence of the sulfate-reducing firmicute Desulfotomaculum ruminis type strain (DL(T)) |
| title_full_unstemmed | Complete genome sequence of the sulfate-reducing firmicute Desulfotomaculum ruminis type strain (DL(T)) |
| title_short | Complete genome sequence of the sulfate-reducing firmicute Desulfotomaculum ruminis type strain (DL(T)) |
| title_sort | complete genome sequence of the sulfate-reducing firmicute desulfotomaculum ruminis type strain (dl(t)) |
| topic | Short Genome Reports |
| url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3569383/ https://www.ncbi.nlm.nih.gov/pubmed/23408247 http://dx.doi.org/10.4056/sigs.3226659 |
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