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Complete genome sequence of the plant-associated Serratia plymuthica strain AS13
Serratia plymuthica AS13 is a plant-associated Gammaproteobacteria, isolated from rapeseed roots. It is of special interest because of its ability to inhibit fungal pathogens of rapeseed and to promote plant growth. The complete genome of S. plymuthica AS13 consists of a 5,442,549 bp circular chromo...
| Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
Michigan State University
2012
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3570797/ https://www.ncbi.nlm.nih.gov/pubmed/23450001 http://dx.doi.org/10.4056/sigs.2966299 |
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| author | Neupane, Saraswoti Finlay, Roger D. Kyrpides, Nikos C. Goodwin, Lynne Alström, Sadhna Lucas, Susan Land, Miriam Han, James Lapidus, Alla Cheng, Jan-Fang Bruce, David Pitluck, Sam Peters, Lin Ovchinnikova, Galina Held, Brittany Han, Cliff Detter, John C. Tapia, Roxanne Hauser, Loren Ivanova, Natalia Pagani, Ioanna Woyke, Tanja Klenk, Hans-Peter Högberg, Nils |
| author_facet | Neupane, Saraswoti Finlay, Roger D. Kyrpides, Nikos C. Goodwin, Lynne Alström, Sadhna Lucas, Susan Land, Miriam Han, James Lapidus, Alla Cheng, Jan-Fang Bruce, David Pitluck, Sam Peters, Lin Ovchinnikova, Galina Held, Brittany Han, Cliff Detter, John C. Tapia, Roxanne Hauser, Loren Ivanova, Natalia Pagani, Ioanna Woyke, Tanja Klenk, Hans-Peter Högberg, Nils |
| author_sort | Neupane, Saraswoti |
| collection | PubMed |
| description | Serratia plymuthica AS13 is a plant-associated Gammaproteobacteria, isolated from rapeseed roots. It is of special interest because of its ability to inhibit fungal pathogens of rapeseed and to promote plant growth. The complete genome of S. plymuthica AS13 consists of a 5,442,549 bp circular chromosome. The chromosome contains 4,951 protein-coding genes, 87 tRNA genes and 7 rRNA operons. This genome was sequenced as part of the project entitled “Genomics of four rapeseed plant growth promoting bacteria with antagonistic effect on plant pathogens” within the 2010 DOE-JGI Community Sequencing Program (CSP2010). |
| format | Online Article Text |
| id | pubmed-3570797 |
| institution | National Center for Biotechnology Information |
| language | English |
| publishDate | 2012 |
| publisher | Michigan State University |
| record_format | MEDLINE/PubMed |
| spelling | pubmed-35707972013-02-28 Complete genome sequence of the plant-associated Serratia plymuthica strain AS13 Neupane, Saraswoti Finlay, Roger D. Kyrpides, Nikos C. Goodwin, Lynne Alström, Sadhna Lucas, Susan Land, Miriam Han, James Lapidus, Alla Cheng, Jan-Fang Bruce, David Pitluck, Sam Peters, Lin Ovchinnikova, Galina Held, Brittany Han, Cliff Detter, John C. Tapia, Roxanne Hauser, Loren Ivanova, Natalia Pagani, Ioanna Woyke, Tanja Klenk, Hans-Peter Högberg, Nils Stand Genomic Sci Short Genome Reports Serratia plymuthica AS13 is a plant-associated Gammaproteobacteria, isolated from rapeseed roots. It is of special interest because of its ability to inhibit fungal pathogens of rapeseed and to promote plant growth. The complete genome of S. plymuthica AS13 consists of a 5,442,549 bp circular chromosome. The chromosome contains 4,951 protein-coding genes, 87 tRNA genes and 7 rRNA operons. This genome was sequenced as part of the project entitled “Genomics of four rapeseed plant growth promoting bacteria with antagonistic effect on plant pathogens” within the 2010 DOE-JGI Community Sequencing Program (CSP2010). Michigan State University 2012-09-26 /pmc/articles/PMC3570797/ /pubmed/23450001 http://dx.doi.org/10.4056/sigs.2966299 Text en Copyright © retained by original authors. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
| spellingShingle | Short Genome Reports Neupane, Saraswoti Finlay, Roger D. Kyrpides, Nikos C. Goodwin, Lynne Alström, Sadhna Lucas, Susan Land, Miriam Han, James Lapidus, Alla Cheng, Jan-Fang Bruce, David Pitluck, Sam Peters, Lin Ovchinnikova, Galina Held, Brittany Han, Cliff Detter, John C. Tapia, Roxanne Hauser, Loren Ivanova, Natalia Pagani, Ioanna Woyke, Tanja Klenk, Hans-Peter Högberg, Nils Complete genome sequence of the plant-associated Serratia plymuthica strain AS13 |
| title | Complete genome sequence of the plant-associated Serratia plymuthica strain AS13 |
| title_full | Complete genome sequence of the plant-associated Serratia plymuthica strain AS13 |
| title_fullStr | Complete genome sequence of the plant-associated Serratia plymuthica strain AS13 |
| title_full_unstemmed | Complete genome sequence of the plant-associated Serratia plymuthica strain AS13 |
| title_short | Complete genome sequence of the plant-associated Serratia plymuthica strain AS13 |
| title_sort | complete genome sequence of the plant-associated serratia plymuthica strain as13 |
| topic | Short Genome Reports |
| url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3570797/ https://www.ncbi.nlm.nih.gov/pubmed/23450001 http://dx.doi.org/10.4056/sigs.2966299 |
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