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Dwell Time Distributions of the Molecular Motor Myosin V
The dwell times between two successive steps of the two-headed molecular motor myosin V are governed by non-exponential distributions. These distributions have been determined experimentally for various control parameters such as nucleotide concentrations and external load force. First, we use a sim...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3572133/ https://www.ncbi.nlm.nih.gov/pubmed/23418440 http://dx.doi.org/10.1371/journal.pone.0055366 |
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author | Bierbaum, Veronika Lipowsky, Reinhard |
author_facet | Bierbaum, Veronika Lipowsky, Reinhard |
author_sort | Bierbaum, Veronika |
collection | PubMed |
description | The dwell times between two successive steps of the two-headed molecular motor myosin V are governed by non-exponential distributions. These distributions have been determined experimentally for various control parameters such as nucleotide concentrations and external load force. First, we use a simplified network representation to determine the dwell time distributions of myosin V, with the associated dynamics described by a Markov process on networks with absorbing boundaries. Our approach provides a direct relation between the motor’s chemical kinetics and its stepping properties. In the absence of an external load, the theoretical distributions quantitatively agree with experimental findings for various nucleotide concentrations. Second, using a more complex branched network, which includes ADP release from the leading head, we are able to elucidate the motor’s gating effect. This effect is caused by an asymmetry in the chemical properties of the leading and the trailing head of the motor molecule. In the case of an external load acting on the motor, the corresponding dwell time distributions reveal details about the motor’s backsteps. |
format | Online Article Text |
id | pubmed-3572133 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-35721332013-02-15 Dwell Time Distributions of the Molecular Motor Myosin V Bierbaum, Veronika Lipowsky, Reinhard PLoS One Research Article The dwell times between two successive steps of the two-headed molecular motor myosin V are governed by non-exponential distributions. These distributions have been determined experimentally for various control parameters such as nucleotide concentrations and external load force. First, we use a simplified network representation to determine the dwell time distributions of myosin V, with the associated dynamics described by a Markov process on networks with absorbing boundaries. Our approach provides a direct relation between the motor’s chemical kinetics and its stepping properties. In the absence of an external load, the theoretical distributions quantitatively agree with experimental findings for various nucleotide concentrations. Second, using a more complex branched network, which includes ADP release from the leading head, we are able to elucidate the motor’s gating effect. This effect is caused by an asymmetry in the chemical properties of the leading and the trailing head of the motor molecule. In the case of an external load acting on the motor, the corresponding dwell time distributions reveal details about the motor’s backsteps. Public Library of Science 2013-02-13 /pmc/articles/PMC3572133/ /pubmed/23418440 http://dx.doi.org/10.1371/journal.pone.0055366 Text en © 2013 Bierbaum, Lipowsky http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Bierbaum, Veronika Lipowsky, Reinhard Dwell Time Distributions of the Molecular Motor Myosin V |
title | Dwell Time Distributions of the Molecular Motor Myosin V |
title_full | Dwell Time Distributions of the Molecular Motor Myosin V |
title_fullStr | Dwell Time Distributions of the Molecular Motor Myosin V |
title_full_unstemmed | Dwell Time Distributions of the Molecular Motor Myosin V |
title_short | Dwell Time Distributions of the Molecular Motor Myosin V |
title_sort | dwell time distributions of the molecular motor myosin v |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3572133/ https://www.ncbi.nlm.nih.gov/pubmed/23418440 http://dx.doi.org/10.1371/journal.pone.0055366 |
work_keys_str_mv | AT bierbaumveronika dwelltimedistributionsofthemolecularmotormyosinv AT lipowskyreinhard dwelltimedistributionsofthemolecularmotormyosinv |