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Using Consensus Bayesian Network to Model the Reactive Oxygen Species Regulatory Pathway

Bayesian network is one of the most successful graph models for representing the reactive oxygen species regulatory pathway. With the increasing number of microarray measurements, it is possible to construct the Bayesian network from microarray data directly. Although large numbers of Bayesian netwo...

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Detalles Bibliográficos
Autores principales: Hu, Liangdong, Wang, Limin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3574104/
https://www.ncbi.nlm.nih.gov/pubmed/23457624
http://dx.doi.org/10.1371/journal.pone.0056832
Descripción
Sumario:Bayesian network is one of the most successful graph models for representing the reactive oxygen species regulatory pathway. With the increasing number of microarray measurements, it is possible to construct the Bayesian network from microarray data directly. Although large numbers of Bayesian network learning algorithms have been developed, when applying them to learn Bayesian networks from microarray data, the accuracies are low due to that the databases they used to learn Bayesian networks contain too few microarray data. In this paper, we propose a consensus Bayesian network which is constructed by combining Bayesian networks from relevant literatures and Bayesian networks learned from microarray data. It would have a higher accuracy than the Bayesian networks learned from one database. In the experiment, we validated the Bayesian network combination algorithm on several classic machine learning databases and used the consensus Bayesian network to model the [Image: see text]'s ROS pathway.