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Non-Homologous End-Joining Pathway Associated with Occurrence of Myocardial Infarction: Gene Set Analysis of Genome-Wide Association Study Data
PURPOSE: DNA repair deficiencies have been postulated to play a role in the development and progression of cardiovascular disease (CVD). The hypothesis is that DNA damage accumulating with age may induce cell death, which promotes formation of unstable plaques. Defects in DNA repair mechanisms may t...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3574159/ https://www.ncbi.nlm.nih.gov/pubmed/23457540 http://dx.doi.org/10.1371/journal.pone.0056262 |
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author | Verschuren, Jeffrey J. W. Trompet, Stella Deelen, Joris Stott, David J. Sattar, Naveed Buckley, Brendan M. Ford, Ian Heijmans, Bastiaan T. Guchelaar, Henk-Jan Houwing-Duistermaat, Jeanine J. Slagboom, P. Eline Jukema, J. Wouter |
author_facet | Verschuren, Jeffrey J. W. Trompet, Stella Deelen, Joris Stott, David J. Sattar, Naveed Buckley, Brendan M. Ford, Ian Heijmans, Bastiaan T. Guchelaar, Henk-Jan Houwing-Duistermaat, Jeanine J. Slagboom, P. Eline Jukema, J. Wouter |
author_sort | Verschuren, Jeffrey J. W. |
collection | PubMed |
description | PURPOSE: DNA repair deficiencies have been postulated to play a role in the development and progression of cardiovascular disease (CVD). The hypothesis is that DNA damage accumulating with age may induce cell death, which promotes formation of unstable plaques. Defects in DNA repair mechanisms may therefore increase the risk of CVD events. We examined whether the joints effect of common genetic variants in 5 DNA repair pathways may influence the risk of CVD events. METHODS: The PLINK set-based test was used to examine the association to myocardial infarction (MI) of the DNA repair pathway in GWAS data of 866 subjects of the GENetic DEterminants of Restenosis (GENDER) study and 5,244 subjects of the PROspective Study of Pravastatin in the Elderly at Risk (PROSPER) study. We included the main DNA repair pathways (base excision repair, nucleotide excision repair, mismatch repair, homologous recombination and non-homologous end-joining (NHEJ)) in the analysis. RESULTS: The NHEJ pathway was associated with the occurrence of MI in both GENDER (P = 0.0083) and PROSPER (P = 0.014). This association was mainly driven by genetic variation in the MRE11A gene (P(GENDER) = 0.0001 and P(PROSPER) = 0.002). The homologous recombination pathway was associated with MI in GENDER only (P = 0.011), for the other pathways no associations were observed. CONCLUSION: This is the first study analyzing the joint effect of common genetic variation in DNA repair pathways and the risk of CVD events, demonstrating an association between the NHEJ pathway and MI in 2 different cohorts. |
format | Online Article Text |
id | pubmed-3574159 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-35741592013-03-01 Non-Homologous End-Joining Pathway Associated with Occurrence of Myocardial Infarction: Gene Set Analysis of Genome-Wide Association Study Data Verschuren, Jeffrey J. W. Trompet, Stella Deelen, Joris Stott, David J. Sattar, Naveed Buckley, Brendan M. Ford, Ian Heijmans, Bastiaan T. Guchelaar, Henk-Jan Houwing-Duistermaat, Jeanine J. Slagboom, P. Eline Jukema, J. Wouter PLoS One Research Article PURPOSE: DNA repair deficiencies have been postulated to play a role in the development and progression of cardiovascular disease (CVD). The hypothesis is that DNA damage accumulating with age may induce cell death, which promotes formation of unstable plaques. Defects in DNA repair mechanisms may therefore increase the risk of CVD events. We examined whether the joints effect of common genetic variants in 5 DNA repair pathways may influence the risk of CVD events. METHODS: The PLINK set-based test was used to examine the association to myocardial infarction (MI) of the DNA repair pathway in GWAS data of 866 subjects of the GENetic DEterminants of Restenosis (GENDER) study and 5,244 subjects of the PROspective Study of Pravastatin in the Elderly at Risk (PROSPER) study. We included the main DNA repair pathways (base excision repair, nucleotide excision repair, mismatch repair, homologous recombination and non-homologous end-joining (NHEJ)) in the analysis. RESULTS: The NHEJ pathway was associated with the occurrence of MI in both GENDER (P = 0.0083) and PROSPER (P = 0.014). This association was mainly driven by genetic variation in the MRE11A gene (P(GENDER) = 0.0001 and P(PROSPER) = 0.002). The homologous recombination pathway was associated with MI in GENDER only (P = 0.011), for the other pathways no associations were observed. CONCLUSION: This is the first study analyzing the joint effect of common genetic variation in DNA repair pathways and the risk of CVD events, demonstrating an association between the NHEJ pathway and MI in 2 different cohorts. Public Library of Science 2013-02-15 /pmc/articles/PMC3574159/ /pubmed/23457540 http://dx.doi.org/10.1371/journal.pone.0056262 Text en © 2013 Verschuren et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Verschuren, Jeffrey J. W. Trompet, Stella Deelen, Joris Stott, David J. Sattar, Naveed Buckley, Brendan M. Ford, Ian Heijmans, Bastiaan T. Guchelaar, Henk-Jan Houwing-Duistermaat, Jeanine J. Slagboom, P. Eline Jukema, J. Wouter Non-Homologous End-Joining Pathway Associated with Occurrence of Myocardial Infarction: Gene Set Analysis of Genome-Wide Association Study Data |
title | Non-Homologous End-Joining Pathway Associated with Occurrence of Myocardial Infarction: Gene Set Analysis of Genome-Wide Association Study Data |
title_full | Non-Homologous End-Joining Pathway Associated with Occurrence of Myocardial Infarction: Gene Set Analysis of Genome-Wide Association Study Data |
title_fullStr | Non-Homologous End-Joining Pathway Associated with Occurrence of Myocardial Infarction: Gene Set Analysis of Genome-Wide Association Study Data |
title_full_unstemmed | Non-Homologous End-Joining Pathway Associated with Occurrence of Myocardial Infarction: Gene Set Analysis of Genome-Wide Association Study Data |
title_short | Non-Homologous End-Joining Pathway Associated with Occurrence of Myocardial Infarction: Gene Set Analysis of Genome-Wide Association Study Data |
title_sort | non-homologous end-joining pathway associated with occurrence of myocardial infarction: gene set analysis of genome-wide association study data |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3574159/ https://www.ncbi.nlm.nih.gov/pubmed/23457540 http://dx.doi.org/10.1371/journal.pone.0056262 |
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