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A ribonucleotide Origin for Life – Fluctuation and Near-ideal Reactions

Oligoribonucleotides are potentially capable of Darwinian evolution – they may replicate and can express an independent chemical phenotype, as embodied in modern enzymatic cofactors. Using quantitative chemical kinetics on a sporadically fed ribonucleotide pool, unreliable supplies of unstable activ...

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Autor principal: Yarus, Michael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Netherlands 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3576565/
https://www.ncbi.nlm.nih.gov/pubmed/23344886
http://dx.doi.org/10.1007/s11084-013-9325-6
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author Yarus, Michael
author_facet Yarus, Michael
author_sort Yarus, Michael
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description Oligoribonucleotides are potentially capable of Darwinian evolution – they may replicate and can express an independent chemical phenotype, as embodied in modern enzymatic cofactors. Using quantitative chemical kinetics on a sporadically fed ribonucleotide pool, unreliable supplies of unstable activated ribonucleotides A and B at low concentrations recurrently yield a replicating AB polymer with a potential chemical phenotype. Self-complementary replication in the pool occurs during a minority (here ≈ 35 %) of synthetic episodes that exploit coincidental overlaps between 4, 5 or 6 spikes of arbitrarily arriving substrates. Such uniquely productive synthetic episodes, in which near-ideal reaction sequences recur at random, account for most AB oligonucleotide synthesis, and therefore underlie the emergence of net replication under realistic primordial conditions. Because overlapping substrate spikes are unexpectedly frequent, and in addition, complex spike sequences appear disproportionately, a sporadically fed pool can host unexpectedly complex syntheses. Thus, primordial substrate fluctuations are not necessarily a barrier to Darwinism, but instead can facilitate early evolution.
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spelling pubmed-35765652013-02-21 A ribonucleotide Origin for Life – Fluctuation and Near-ideal Reactions Yarus, Michael Orig Life Evol Biosph Simulation of RNA Replication Oligoribonucleotides are potentially capable of Darwinian evolution – they may replicate and can express an independent chemical phenotype, as embodied in modern enzymatic cofactors. Using quantitative chemical kinetics on a sporadically fed ribonucleotide pool, unreliable supplies of unstable activated ribonucleotides A and B at low concentrations recurrently yield a replicating AB polymer with a potential chemical phenotype. Self-complementary replication in the pool occurs during a minority (here ≈ 35 %) of synthetic episodes that exploit coincidental overlaps between 4, 5 or 6 spikes of arbitrarily arriving substrates. Such uniquely productive synthetic episodes, in which near-ideal reaction sequences recur at random, account for most AB oligonucleotide synthesis, and therefore underlie the emergence of net replication under realistic primordial conditions. Because overlapping substrate spikes are unexpectedly frequent, and in addition, complex spike sequences appear disproportionately, a sporadically fed pool can host unexpectedly complex syntheses. Thus, primordial substrate fluctuations are not necessarily a barrier to Darwinism, but instead can facilitate early evolution. Springer Netherlands 2013-01-24 2013 /pmc/articles/PMC3576565/ /pubmed/23344886 http://dx.doi.org/10.1007/s11084-013-9325-6 Text en © The Author(s) 2013 https://creativecommons.org/licenses/by-nc/2.0/ Open Access This article is distributed under the terms of the Creative Commons Attribution License which permits any use, distribution, and reproduction in any medium, provided the original author(s) and the source are credited.
spellingShingle Simulation of RNA Replication
Yarus, Michael
A ribonucleotide Origin for Life – Fluctuation and Near-ideal Reactions
title A ribonucleotide Origin for Life – Fluctuation and Near-ideal Reactions
title_full A ribonucleotide Origin for Life – Fluctuation and Near-ideal Reactions
title_fullStr A ribonucleotide Origin for Life – Fluctuation and Near-ideal Reactions
title_full_unstemmed A ribonucleotide Origin for Life – Fluctuation and Near-ideal Reactions
title_short A ribonucleotide Origin for Life – Fluctuation and Near-ideal Reactions
title_sort ribonucleotide origin for life – fluctuation and near-ideal reactions
topic Simulation of RNA Replication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3576565/
https://www.ncbi.nlm.nih.gov/pubmed/23344886
http://dx.doi.org/10.1007/s11084-013-9325-6
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