A Simple Sequence Repeat- and Single-Nucleotide Polymorphism-Based Genetic Linkage Map of the Brown Planthopper, Nilaparvata lugens

In this study, we developed the first genetic linkage map for the major rice insect pest, the brown planthopper (BPH, Nilaparvata lugens). The linkage map was constructed by integrating linkage data from two backcross populations derived from three inbred BPH strains. The consensus map consists of 4...

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Detalles Bibliográficos
Autores principales: Jairin, Jirapong, Kobayashi, Tetsuya, Yamagata, Yoshiyuki, Sanada-Morimura, Sachiyo, Mori, Kazuki, Tashiro, Kosuke, Kuhara, Satoru, Kuwazaki, Seigo, Urio, Masahiro, Suetsugu, Yoshitaka, Yamamoto, Kimiko, Matsumura, Masaya, Yasui, Hideshi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2013
Materias:
Full Papers
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3576655/
https://www.ncbi.nlm.nih.gov/pubmed/23204257
http://dx.doi.org/10.1093/dnares/dss030
Descripción
Sumario:In this study, we developed the first genetic linkage map for the major rice insect pest, the brown planthopper (BPH, Nilaparvata lugens). The linkage map was constructed by integrating linkage data from two backcross populations derived from three inbred BPH strains. The consensus map consists of 474 simple sequence repeats, 43 single-nucleotide polymorphisms, and 1 sequence-tagged site, for a total of 518 markers at 472 unique positions in 17 linkage groups. The linkage groups cover 1093.9 cM, with an average distance of 2.3 cM between loci. The average number of marker loci per linkage group was 27.8. The sex-linkage group was identified by exploiting X-linked and Y-specific markers. Our linkage map and the newly developed markers used to create it constitute an essential resource and a useful framework for future genetic analyses in BPH.

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