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Ribosome structures to near-atomic resolution from thirty thousand cryo-EM particles

Although electron cryo-microscopy (cryo-EM) single-particle analysis has become an important tool for structural biology of large and flexible macro-molecular assemblies, the technique has not yet reached its full potential. Besides fundamental limits imposed by radiation damage, poor detectors and...

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Autores principales: Bai, Xiao-chen, Fernandez, Israel S, McMullan, Greg, Scheres, Sjors HW
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3576727/
https://www.ncbi.nlm.nih.gov/pubmed/23427024
http://dx.doi.org/10.7554/eLife.00461
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author Bai, Xiao-chen
Fernandez, Israel S
McMullan, Greg
Scheres, Sjors HW
author_facet Bai, Xiao-chen
Fernandez, Israel S
McMullan, Greg
Scheres, Sjors HW
author_sort Bai, Xiao-chen
collection PubMed
description Although electron cryo-microscopy (cryo-EM) single-particle analysis has become an important tool for structural biology of large and flexible macro-molecular assemblies, the technique has not yet reached its full potential. Besides fundamental limits imposed by radiation damage, poor detectors and beam-induced sample movement have been shown to degrade attainable resolutions. A new generation of direct electron detectors may ameliorate both effects. Apart from exhibiting improved signal-to-noise performance, these cameras are also fast enough to follow particle movements during electron irradiation. Here, we assess the potentials of this technology for cryo-EM structure determination. Using a newly developed statistical movie processing approach to compensate for beam-induced movement, we show that ribosome reconstructions with unprecedented resolutions may be calculated from almost two orders of magnitude fewer particles than used previously. Therefore, this methodology may expand the scope of high-resolution cryo-EM to a broad range of biological specimens. DOI: http://dx.doi.org/10.7554/eLife.00461.001
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spelling pubmed-35767272013-02-20 Ribosome structures to near-atomic resolution from thirty thousand cryo-EM particles Bai, Xiao-chen Fernandez, Israel S McMullan, Greg Scheres, Sjors HW eLife Biophysics and Structural Biology Although electron cryo-microscopy (cryo-EM) single-particle analysis has become an important tool for structural biology of large and flexible macro-molecular assemblies, the technique has not yet reached its full potential. Besides fundamental limits imposed by radiation damage, poor detectors and beam-induced sample movement have been shown to degrade attainable resolutions. A new generation of direct electron detectors may ameliorate both effects. Apart from exhibiting improved signal-to-noise performance, these cameras are also fast enough to follow particle movements during electron irradiation. Here, we assess the potentials of this technology for cryo-EM structure determination. Using a newly developed statistical movie processing approach to compensate for beam-induced movement, we show that ribosome reconstructions with unprecedented resolutions may be calculated from almost two orders of magnitude fewer particles than used previously. Therefore, this methodology may expand the scope of high-resolution cryo-EM to a broad range of biological specimens. DOI: http://dx.doi.org/10.7554/eLife.00461.001 eLife Sciences Publications, Ltd 2013-02-19 /pmc/articles/PMC3576727/ /pubmed/23427024 http://dx.doi.org/10.7554/eLife.00461 Text en Copyright © 2013, Bai et al http://creativecommons.org/licenses/by/3.0/ This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Biophysics and Structural Biology
Bai, Xiao-chen
Fernandez, Israel S
McMullan, Greg
Scheres, Sjors HW
Ribosome structures to near-atomic resolution from thirty thousand cryo-EM particles
title Ribosome structures to near-atomic resolution from thirty thousand cryo-EM particles
title_full Ribosome structures to near-atomic resolution from thirty thousand cryo-EM particles
title_fullStr Ribosome structures to near-atomic resolution from thirty thousand cryo-EM particles
title_full_unstemmed Ribosome structures to near-atomic resolution from thirty thousand cryo-EM particles
title_short Ribosome structures to near-atomic resolution from thirty thousand cryo-EM particles
title_sort ribosome structures to near-atomic resolution from thirty thousand cryo-em particles
topic Biophysics and Structural Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3576727/
https://www.ncbi.nlm.nih.gov/pubmed/23427024
http://dx.doi.org/10.7554/eLife.00461
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