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Genetic Variation of ITGB3 Is Associated with Asthma in Chinese Han Children

Previous studies have demonstrated that integrins are involved in the aetiology of asthma. Several single-nucleotide polymorphisms (SNPs) in the integrin β3 (ITGB3) gene are significantly associated with asthma in Western populations. Given the important roles of environmental exposures in the devel...

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Autores principales: Zhang, Yan, Han, Yuling, Dong, Liang, Yu, Huafeng, Cheng, Lu, Zhao, Xiuxia, Ding, Mingjie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3579922/
https://www.ncbi.nlm.nih.gov/pubmed/23451109
http://dx.doi.org/10.1371/journal.pone.0056914
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author Zhang, Yan
Han, Yuling
Dong, Liang
Yu, Huafeng
Cheng, Lu
Zhao, Xiuxia
Ding, Mingjie
author_facet Zhang, Yan
Han, Yuling
Dong, Liang
Yu, Huafeng
Cheng, Lu
Zhao, Xiuxia
Ding, Mingjie
author_sort Zhang, Yan
collection PubMed
description Previous studies have demonstrated that integrins are involved in the aetiology of asthma. Several single-nucleotide polymorphisms (SNPs) in the integrin β3 (ITGB3) gene are significantly associated with asthma in Western populations. Given the important roles of environmental exposures in the development of asthma, we evaluated the associations between six SNPs in ITGB3 and asthma in Chinese Han children. A total of 321 unrelated Chinese children with asthma and 315 healthy children were recruited for the study. SNP genotyping was performed by high-resolution melting analysis (HRM). The selected SNPs were well genotyped by HRM, and SNP rs3809865 in the 3′ untranslated region (3′UTR) of ITGB3 was found to be strongly associated with asthma (adjusted p = 0.004). The minor allele of rs3809865 showed a protective effect against asthma (OR: 0.59; 95% CI: 0.43–0.8). The seed regions of two miRNAs (hsa-mir-124 and hsa-mir-506) were predicted to bind to the sequence containing rs3809865 by TargetScan and PITA. Luciferase reporter assays demonstrated that the T allele of rs3809865 was more efficiently targeted by hsa-mir-124 than was the A allele, which suggested that rs3809865 could affect the binding of hsa-mir-124 to ITGB3. Furthermore, the transfection of A549 cells with hsa-mir-124 resulted in the downregulation of ITGB3 expression. Our results revealed that rs3809865 was significantly associated with asthma due to its effect on the binding of hsa-mir-124 to ITGB3.
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spelling pubmed-35799222013-02-28 Genetic Variation of ITGB3 Is Associated with Asthma in Chinese Han Children Zhang, Yan Han, Yuling Dong, Liang Yu, Huafeng Cheng, Lu Zhao, Xiuxia Ding, Mingjie PLoS One Research Article Previous studies have demonstrated that integrins are involved in the aetiology of asthma. Several single-nucleotide polymorphisms (SNPs) in the integrin β3 (ITGB3) gene are significantly associated with asthma in Western populations. Given the important roles of environmental exposures in the development of asthma, we evaluated the associations between six SNPs in ITGB3 and asthma in Chinese Han children. A total of 321 unrelated Chinese children with asthma and 315 healthy children were recruited for the study. SNP genotyping was performed by high-resolution melting analysis (HRM). The selected SNPs were well genotyped by HRM, and SNP rs3809865 in the 3′ untranslated region (3′UTR) of ITGB3 was found to be strongly associated with asthma (adjusted p = 0.004). The minor allele of rs3809865 showed a protective effect against asthma (OR: 0.59; 95% CI: 0.43–0.8). The seed regions of two miRNAs (hsa-mir-124 and hsa-mir-506) were predicted to bind to the sequence containing rs3809865 by TargetScan and PITA. Luciferase reporter assays demonstrated that the T allele of rs3809865 was more efficiently targeted by hsa-mir-124 than was the A allele, which suggested that rs3809865 could affect the binding of hsa-mir-124 to ITGB3. Furthermore, the transfection of A549 cells with hsa-mir-124 resulted in the downregulation of ITGB3 expression. Our results revealed that rs3809865 was significantly associated with asthma due to its effect on the binding of hsa-mir-124 to ITGB3. Public Library of Science 2013-02-22 /pmc/articles/PMC3579922/ /pubmed/23451109 http://dx.doi.org/10.1371/journal.pone.0056914 Text en © 2013 Zhang et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Zhang, Yan
Han, Yuling
Dong, Liang
Yu, Huafeng
Cheng, Lu
Zhao, Xiuxia
Ding, Mingjie
Genetic Variation of ITGB3 Is Associated with Asthma in Chinese Han Children
title Genetic Variation of ITGB3 Is Associated with Asthma in Chinese Han Children
title_full Genetic Variation of ITGB3 Is Associated with Asthma in Chinese Han Children
title_fullStr Genetic Variation of ITGB3 Is Associated with Asthma in Chinese Han Children
title_full_unstemmed Genetic Variation of ITGB3 Is Associated with Asthma in Chinese Han Children
title_short Genetic Variation of ITGB3 Is Associated with Asthma in Chinese Han Children
title_sort genetic variation of itgb3 is associated with asthma in chinese han children
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3579922/
https://www.ncbi.nlm.nih.gov/pubmed/23451109
http://dx.doi.org/10.1371/journal.pone.0056914
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