Cargando…

Association of genetic polymorphisms with chronic obstructive pulmonary disease in the Chinese Han population: a case–control study

BACKGROUND: Chronic obstructive pulmonary disease (COPD) is influenced by both environmental and genetic factors. Few gene studies of the Chinese population have focused on COPD. We investigated candidate genes associated with susceptibility to COPD in the Chinese Han population. METHODS: A total of...

Descripción completa

Detalles Bibliográficos
Autores principales: Guo, Yi, Gong, Yi, Pan, Chunming, Qian, Yanrong, Shi, Guochao, Cheng, Qijian, Li, Qingyun, Ren, Lei, Weng, Qiuling, Chen, Yi, Cheng, Ting, Fan, Liang, Jiang, Zhihong, Wan, Huanying
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3582579/
https://www.ncbi.nlm.nih.gov/pubmed/23267696
http://dx.doi.org/10.1186/1755-8794-5-64
_version_ 1782260595811155968
author Guo, Yi
Gong, Yi
Pan, Chunming
Qian, Yanrong
Shi, Guochao
Cheng, Qijian
Li, Qingyun
Ren, Lei
Weng, Qiuling
Chen, Yi
Cheng, Ting
Fan, Liang
Jiang, Zhihong
Wan, Huanying
author_facet Guo, Yi
Gong, Yi
Pan, Chunming
Qian, Yanrong
Shi, Guochao
Cheng, Qijian
Li, Qingyun
Ren, Lei
Weng, Qiuling
Chen, Yi
Cheng, Ting
Fan, Liang
Jiang, Zhihong
Wan, Huanying
author_sort Guo, Yi
collection PubMed
description BACKGROUND: Chronic obstructive pulmonary disease (COPD) is influenced by both environmental and genetic factors. Few gene studies of the Chinese population have focused on COPD. We investigated candidate genes associated with susceptibility to COPD in the Chinese Han population. METHODS: A total of 331 COPD patients and 213 control subjects were recruited for this study. Nighty-seven single-nucleotide polymorphisms (SNPs) of 46 genes were selected for genotyping. Genotypes were determined using multiplex polymerase chain reaction (PCR). RESULTS: Significant differences between patients and healthy controls were observed in the allele frequencies of seven SNPs: rs1205 C, rs2353397 C, rs20541 T, rs2070600 G, rs10947233 G, rs1800629 G, and rs2241712 A. After Bonferroni correction, rs2353397 C was most strongly associated with susceptibility to COPD. Haplotype analysis showed that the frequencies of the GC, GT haplotypes of rs2241718 (TGF-β1 gene), and rs6957 (CDC97 gene) were significantly higher in the control group than in the COPD case group (p=1.88×10(-9)); the frequencies of the TT haplotype of rs1205 and rs2808630 (CRP gene) were significantly higher in the control group (p=0.0377). CONCLUSION: Our study suggests some genetic variants associated with the susceptibility of COPD in the Chinese Han population.
format Online
Article
Text
id pubmed-3582579
institution National Center for Biotechnology Information
language English
publishDate 2012
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-35825792013-02-27 Association of genetic polymorphisms with chronic obstructive pulmonary disease in the Chinese Han population: a case–control study Guo, Yi Gong, Yi Pan, Chunming Qian, Yanrong Shi, Guochao Cheng, Qijian Li, Qingyun Ren, Lei Weng, Qiuling Chen, Yi Cheng, Ting Fan, Liang Jiang, Zhihong Wan, Huanying BMC Med Genomics Research Article BACKGROUND: Chronic obstructive pulmonary disease (COPD) is influenced by both environmental and genetic factors. Few gene studies of the Chinese population have focused on COPD. We investigated candidate genes associated with susceptibility to COPD in the Chinese Han population. METHODS: A total of 331 COPD patients and 213 control subjects were recruited for this study. Nighty-seven single-nucleotide polymorphisms (SNPs) of 46 genes were selected for genotyping. Genotypes were determined using multiplex polymerase chain reaction (PCR). RESULTS: Significant differences between patients and healthy controls were observed in the allele frequencies of seven SNPs: rs1205 C, rs2353397 C, rs20541 T, rs2070600 G, rs10947233 G, rs1800629 G, and rs2241712 A. After Bonferroni correction, rs2353397 C was most strongly associated with susceptibility to COPD. Haplotype analysis showed that the frequencies of the GC, GT haplotypes of rs2241718 (TGF-β1 gene), and rs6957 (CDC97 gene) were significantly higher in the control group than in the COPD case group (p=1.88×10(-9)); the frequencies of the TT haplotype of rs1205 and rs2808630 (CRP gene) were significantly higher in the control group (p=0.0377). CONCLUSION: Our study suggests some genetic variants associated with the susceptibility of COPD in the Chinese Han population. BioMed Central 2012-12-26 /pmc/articles/PMC3582579/ /pubmed/23267696 http://dx.doi.org/10.1186/1755-8794-5-64 Text en Copyright ©2012 Guo et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Guo, Yi
Gong, Yi
Pan, Chunming
Qian, Yanrong
Shi, Guochao
Cheng, Qijian
Li, Qingyun
Ren, Lei
Weng, Qiuling
Chen, Yi
Cheng, Ting
Fan, Liang
Jiang, Zhihong
Wan, Huanying
Association of genetic polymorphisms with chronic obstructive pulmonary disease in the Chinese Han population: a case–control study
title Association of genetic polymorphisms with chronic obstructive pulmonary disease in the Chinese Han population: a case–control study
title_full Association of genetic polymorphisms with chronic obstructive pulmonary disease in the Chinese Han population: a case–control study
title_fullStr Association of genetic polymorphisms with chronic obstructive pulmonary disease in the Chinese Han population: a case–control study
title_full_unstemmed Association of genetic polymorphisms with chronic obstructive pulmonary disease in the Chinese Han population: a case–control study
title_short Association of genetic polymorphisms with chronic obstructive pulmonary disease in the Chinese Han population: a case–control study
title_sort association of genetic polymorphisms with chronic obstructive pulmonary disease in the chinese han population: a case–control study
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3582579/
https://www.ncbi.nlm.nih.gov/pubmed/23267696
http://dx.doi.org/10.1186/1755-8794-5-64
work_keys_str_mv AT guoyi associationofgeneticpolymorphismswithchronicobstructivepulmonarydiseaseinthechinesehanpopulationacasecontrolstudy
AT gongyi associationofgeneticpolymorphismswithchronicobstructivepulmonarydiseaseinthechinesehanpopulationacasecontrolstudy
AT panchunming associationofgeneticpolymorphismswithchronicobstructivepulmonarydiseaseinthechinesehanpopulationacasecontrolstudy
AT qianyanrong associationofgeneticpolymorphismswithchronicobstructivepulmonarydiseaseinthechinesehanpopulationacasecontrolstudy
AT shiguochao associationofgeneticpolymorphismswithchronicobstructivepulmonarydiseaseinthechinesehanpopulationacasecontrolstudy
AT chengqijian associationofgeneticpolymorphismswithchronicobstructivepulmonarydiseaseinthechinesehanpopulationacasecontrolstudy
AT liqingyun associationofgeneticpolymorphismswithchronicobstructivepulmonarydiseaseinthechinesehanpopulationacasecontrolstudy
AT renlei associationofgeneticpolymorphismswithchronicobstructivepulmonarydiseaseinthechinesehanpopulationacasecontrolstudy
AT wengqiuling associationofgeneticpolymorphismswithchronicobstructivepulmonarydiseaseinthechinesehanpopulationacasecontrolstudy
AT chenyi associationofgeneticpolymorphismswithchronicobstructivepulmonarydiseaseinthechinesehanpopulationacasecontrolstudy
AT chengting associationofgeneticpolymorphismswithchronicobstructivepulmonarydiseaseinthechinesehanpopulationacasecontrolstudy
AT fanliang associationofgeneticpolymorphismswithchronicobstructivepulmonarydiseaseinthechinesehanpopulationacasecontrolstudy
AT jiangzhihong associationofgeneticpolymorphismswithchronicobstructivepulmonarydiseaseinthechinesehanpopulationacasecontrolstudy
AT wanhuanying associationofgeneticpolymorphismswithchronicobstructivepulmonarydiseaseinthechinesehanpopulationacasecontrolstudy