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Association of genetic polymorphisms with chronic obstructive pulmonary disease in the Chinese Han population: a case–control study
BACKGROUND: Chronic obstructive pulmonary disease (COPD) is influenced by both environmental and genetic factors. Few gene studies of the Chinese population have focused on COPD. We investigated candidate genes associated with susceptibility to COPD in the Chinese Han population. METHODS: A total of...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3582579/ https://www.ncbi.nlm.nih.gov/pubmed/23267696 http://dx.doi.org/10.1186/1755-8794-5-64 |
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author | Guo, Yi Gong, Yi Pan, Chunming Qian, Yanrong Shi, Guochao Cheng, Qijian Li, Qingyun Ren, Lei Weng, Qiuling Chen, Yi Cheng, Ting Fan, Liang Jiang, Zhihong Wan, Huanying |
author_facet | Guo, Yi Gong, Yi Pan, Chunming Qian, Yanrong Shi, Guochao Cheng, Qijian Li, Qingyun Ren, Lei Weng, Qiuling Chen, Yi Cheng, Ting Fan, Liang Jiang, Zhihong Wan, Huanying |
author_sort | Guo, Yi |
collection | PubMed |
description | BACKGROUND: Chronic obstructive pulmonary disease (COPD) is influenced by both environmental and genetic factors. Few gene studies of the Chinese population have focused on COPD. We investigated candidate genes associated with susceptibility to COPD in the Chinese Han population. METHODS: A total of 331 COPD patients and 213 control subjects were recruited for this study. Nighty-seven single-nucleotide polymorphisms (SNPs) of 46 genes were selected for genotyping. Genotypes were determined using multiplex polymerase chain reaction (PCR). RESULTS: Significant differences between patients and healthy controls were observed in the allele frequencies of seven SNPs: rs1205 C, rs2353397 C, rs20541 T, rs2070600 G, rs10947233 G, rs1800629 G, and rs2241712 A. After Bonferroni correction, rs2353397 C was most strongly associated with susceptibility to COPD. Haplotype analysis showed that the frequencies of the GC, GT haplotypes of rs2241718 (TGF-β1 gene), and rs6957 (CDC97 gene) were significantly higher in the control group than in the COPD case group (p=1.88×10(-9)); the frequencies of the TT haplotype of rs1205 and rs2808630 (CRP gene) were significantly higher in the control group (p=0.0377). CONCLUSION: Our study suggests some genetic variants associated with the susceptibility of COPD in the Chinese Han population. |
format | Online Article Text |
id | pubmed-3582579 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-35825792013-02-27 Association of genetic polymorphisms with chronic obstructive pulmonary disease in the Chinese Han population: a case–control study Guo, Yi Gong, Yi Pan, Chunming Qian, Yanrong Shi, Guochao Cheng, Qijian Li, Qingyun Ren, Lei Weng, Qiuling Chen, Yi Cheng, Ting Fan, Liang Jiang, Zhihong Wan, Huanying BMC Med Genomics Research Article BACKGROUND: Chronic obstructive pulmonary disease (COPD) is influenced by both environmental and genetic factors. Few gene studies of the Chinese population have focused on COPD. We investigated candidate genes associated with susceptibility to COPD in the Chinese Han population. METHODS: A total of 331 COPD patients and 213 control subjects were recruited for this study. Nighty-seven single-nucleotide polymorphisms (SNPs) of 46 genes were selected for genotyping. Genotypes were determined using multiplex polymerase chain reaction (PCR). RESULTS: Significant differences between patients and healthy controls were observed in the allele frequencies of seven SNPs: rs1205 C, rs2353397 C, rs20541 T, rs2070600 G, rs10947233 G, rs1800629 G, and rs2241712 A. After Bonferroni correction, rs2353397 C was most strongly associated with susceptibility to COPD. Haplotype analysis showed that the frequencies of the GC, GT haplotypes of rs2241718 (TGF-β1 gene), and rs6957 (CDC97 gene) were significantly higher in the control group than in the COPD case group (p=1.88×10(-9)); the frequencies of the TT haplotype of rs1205 and rs2808630 (CRP gene) were significantly higher in the control group (p=0.0377). CONCLUSION: Our study suggests some genetic variants associated with the susceptibility of COPD in the Chinese Han population. BioMed Central 2012-12-26 /pmc/articles/PMC3582579/ /pubmed/23267696 http://dx.doi.org/10.1186/1755-8794-5-64 Text en Copyright ©2012 Guo et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Guo, Yi Gong, Yi Pan, Chunming Qian, Yanrong Shi, Guochao Cheng, Qijian Li, Qingyun Ren, Lei Weng, Qiuling Chen, Yi Cheng, Ting Fan, Liang Jiang, Zhihong Wan, Huanying Association of genetic polymorphisms with chronic obstructive pulmonary disease in the Chinese Han population: a case–control study |
title | Association of genetic polymorphisms with chronic obstructive pulmonary disease in the Chinese Han population: a case–control study |
title_full | Association of genetic polymorphisms with chronic obstructive pulmonary disease in the Chinese Han population: a case–control study |
title_fullStr | Association of genetic polymorphisms with chronic obstructive pulmonary disease in the Chinese Han population: a case–control study |
title_full_unstemmed | Association of genetic polymorphisms with chronic obstructive pulmonary disease in the Chinese Han population: a case–control study |
title_short | Association of genetic polymorphisms with chronic obstructive pulmonary disease in the Chinese Han population: a case–control study |
title_sort | association of genetic polymorphisms with chronic obstructive pulmonary disease in the chinese han population: a case–control study |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3582579/ https://www.ncbi.nlm.nih.gov/pubmed/23267696 http://dx.doi.org/10.1186/1755-8794-5-64 |
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