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On the Challenge of Fitting Tree Size Distributions in Ecology
Patterns that resemble strongly skewed size distributions are frequently observed in ecology. A typical example represents tree size distributions of stem diameters. Empirical tests of ecological theories predicting their parameters have been conducted, but the results are difficult to interpret bec...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3585190/ https://www.ncbi.nlm.nih.gov/pubmed/23469137 http://dx.doi.org/10.1371/journal.pone.0058036 |
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author | Taubert, Franziska Hartig, Florian Dobner, Hans-Jürgen Huth, Andreas |
author_facet | Taubert, Franziska Hartig, Florian Dobner, Hans-Jürgen Huth, Andreas |
author_sort | Taubert, Franziska |
collection | PubMed |
description | Patterns that resemble strongly skewed size distributions are frequently observed in ecology. A typical example represents tree size distributions of stem diameters. Empirical tests of ecological theories predicting their parameters have been conducted, but the results are difficult to interpret because the statistical methods that are applied to fit such decaying size distributions vary. In addition, binning of field data as well as measurement errors might potentially bias parameter estimates. Here, we compare three different methods for parameter estimation – the common maximum likelihood estimation (MLE) and two modified types of MLE correcting for binning of observations or random measurement errors. We test whether three typical frequency distributions, namely the power-law, negative exponential and Weibull distribution can be precisely identified, and how parameter estimates are biased when observations are additionally either binned or contain measurement error. We show that uncorrected MLE already loses the ability to discern functional form and parameters at relatively small levels of uncertainties. The modified MLE methods that consider such uncertainties (either binning or measurement error) are comparatively much more robust. We conclude that it is important to reduce binning of observations, if possible, and to quantify observation accuracy in empirical studies for fitting strongly skewed size distributions. In general, modified MLE methods that correct binning or measurement errors can be applied to ensure reliable results. |
format | Online Article Text |
id | pubmed-3585190 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-35851902013-03-06 On the Challenge of Fitting Tree Size Distributions in Ecology Taubert, Franziska Hartig, Florian Dobner, Hans-Jürgen Huth, Andreas PLoS One Research Article Patterns that resemble strongly skewed size distributions are frequently observed in ecology. A typical example represents tree size distributions of stem diameters. Empirical tests of ecological theories predicting their parameters have been conducted, but the results are difficult to interpret because the statistical methods that are applied to fit such decaying size distributions vary. In addition, binning of field data as well as measurement errors might potentially bias parameter estimates. Here, we compare three different methods for parameter estimation – the common maximum likelihood estimation (MLE) and two modified types of MLE correcting for binning of observations or random measurement errors. We test whether three typical frequency distributions, namely the power-law, negative exponential and Weibull distribution can be precisely identified, and how parameter estimates are biased when observations are additionally either binned or contain measurement error. We show that uncorrected MLE already loses the ability to discern functional form and parameters at relatively small levels of uncertainties. The modified MLE methods that consider such uncertainties (either binning or measurement error) are comparatively much more robust. We conclude that it is important to reduce binning of observations, if possible, and to quantify observation accuracy in empirical studies for fitting strongly skewed size distributions. In general, modified MLE methods that correct binning or measurement errors can be applied to ensure reliable results. Public Library of Science 2013-02-28 /pmc/articles/PMC3585190/ /pubmed/23469137 http://dx.doi.org/10.1371/journal.pone.0058036 Text en © 2013 Taubert et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Taubert, Franziska Hartig, Florian Dobner, Hans-Jürgen Huth, Andreas On the Challenge of Fitting Tree Size Distributions in Ecology |
title | On the Challenge of Fitting Tree Size Distributions in Ecology |
title_full | On the Challenge of Fitting Tree Size Distributions in Ecology |
title_fullStr | On the Challenge of Fitting Tree Size Distributions in Ecology |
title_full_unstemmed | On the Challenge of Fitting Tree Size Distributions in Ecology |
title_short | On the Challenge of Fitting Tree Size Distributions in Ecology |
title_sort | on the challenge of fitting tree size distributions in ecology |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3585190/ https://www.ncbi.nlm.nih.gov/pubmed/23469137 http://dx.doi.org/10.1371/journal.pone.0058036 |
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