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A shape-optimized framework for kidney segmentation in ultrasound images using NLTV denoising and DRLSE

BACKGROUND: Computer-assisted surgical navigation aims to provide surgeons with anatomical target localization and critical structure observation, where medical image processing methods such as segmentation, registration and visualization play a critical role. Percutaneous renal intervention plays a...

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Autores principales: Yang, Fan, Qin, Wenjian, Xie, Yaoqin, Wen, Tiexiang, Gu, Jia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3585889/
https://www.ncbi.nlm.nih.gov/pubmed/23110664
http://dx.doi.org/10.1186/1475-925X-11-82
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author Yang, Fan
Qin, Wenjian
Xie, Yaoqin
Wen, Tiexiang
Gu, Jia
author_facet Yang, Fan
Qin, Wenjian
Xie, Yaoqin
Wen, Tiexiang
Gu, Jia
author_sort Yang, Fan
collection PubMed
description BACKGROUND: Computer-assisted surgical navigation aims to provide surgeons with anatomical target localization and critical structure observation, where medical image processing methods such as segmentation, registration and visualization play a critical role. Percutaneous renal intervention plays an important role in several minimally-invasive surgeries of kidney, such as Percutaneous Nephrolithotomy (PCNL) and Radio-Frequency Ablation (RFA) of kidney tumors, which refers to a surgical procedure where access to a target inside the kidney by a needle puncture of the skin. Thus, kidney segmentation is a key step in developing any ultrasound-based computer-aided diagnosis systems for percutaneous renal intervention. METHODS: In this paper, we proposed a novel framework for kidney segmentation of ultrasound (US) images combined with nonlocal total variation (NLTV) image denoising, distance regularized level set evolution (DRLSE) and shape prior. Firstly, a denoised US image was obtained by NLTV image denoising. Secondly, DRLSE was applied in the kidney segmentation to get binary image. In this case, black and white region represented the kidney and the background respectively. The last stage is that the shape prior was applied to get a shape with the smooth boundary from the kidney shape space, which was used to optimize the segmentation result of the second step. The alignment model was used occasionally to enlarge the shape space in order to increase segmentation accuracy. Experimental results on both synthetic images and US data are given to demonstrate the effectiveness and accuracy of the proposed algorithm. RESULTS: We applied our segmentation framework on synthetic and real US images to demonstrate the better segmentation results of our method. From the qualitative results, the experiment results show that the segmentation results are much closer to the manual segmentations. The sensitivity (SN), specificity (SP) and positive predictive value (PPV) of our segmentation result can reach 95%, 96% and 91% respectively; As well as we compared our results with the edge-based level set and level set with shape prior method by means of the same quantitative index, such as SN, SP, PPV, which have corresponding values of 97%, 88%, 78% and 81%, 91%, 80% respectively. CONCLUSIONS: We have found NLTV denosing method is a good initial process for the ultrasound segmentation. This initial process can make us use simple segmentation method to get satisfied results. Furthermore, we can get the final segmentation results with smooth boundary by using the shape prior after the segmentation process. Every step enjoy simple energy model and every step in this framework is needed to keep a good robust and convergence property.
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spelling pubmed-35858892013-03-12 A shape-optimized framework for kidney segmentation in ultrasound images using NLTV denoising and DRLSE Yang, Fan Qin, Wenjian Xie, Yaoqin Wen, Tiexiang Gu, Jia Biomed Eng Online Research BACKGROUND: Computer-assisted surgical navigation aims to provide surgeons with anatomical target localization and critical structure observation, where medical image processing methods such as segmentation, registration and visualization play a critical role. Percutaneous renal intervention plays an important role in several minimally-invasive surgeries of kidney, such as Percutaneous Nephrolithotomy (PCNL) and Radio-Frequency Ablation (RFA) of kidney tumors, which refers to a surgical procedure where access to a target inside the kidney by a needle puncture of the skin. Thus, kidney segmentation is a key step in developing any ultrasound-based computer-aided diagnosis systems for percutaneous renal intervention. METHODS: In this paper, we proposed a novel framework for kidney segmentation of ultrasound (US) images combined with nonlocal total variation (NLTV) image denoising, distance regularized level set evolution (DRLSE) and shape prior. Firstly, a denoised US image was obtained by NLTV image denoising. Secondly, DRLSE was applied in the kidney segmentation to get binary image. In this case, black and white region represented the kidney and the background respectively. The last stage is that the shape prior was applied to get a shape with the smooth boundary from the kidney shape space, which was used to optimize the segmentation result of the second step. The alignment model was used occasionally to enlarge the shape space in order to increase segmentation accuracy. Experimental results on both synthetic images and US data are given to demonstrate the effectiveness and accuracy of the proposed algorithm. RESULTS: We applied our segmentation framework on synthetic and real US images to demonstrate the better segmentation results of our method. From the qualitative results, the experiment results show that the segmentation results are much closer to the manual segmentations. The sensitivity (SN), specificity (SP) and positive predictive value (PPV) of our segmentation result can reach 95%, 96% and 91% respectively; As well as we compared our results with the edge-based level set and level set with shape prior method by means of the same quantitative index, such as SN, SP, PPV, which have corresponding values of 97%, 88%, 78% and 81%, 91%, 80% respectively. CONCLUSIONS: We have found NLTV denosing method is a good initial process for the ultrasound segmentation. This initial process can make us use simple segmentation method to get satisfied results. Furthermore, we can get the final segmentation results with smooth boundary by using the shape prior after the segmentation process. Every step enjoy simple energy model and every step in this framework is needed to keep a good robust and convergence property. BioMed Central 2012-10-30 /pmc/articles/PMC3585889/ /pubmed/23110664 http://dx.doi.org/10.1186/1475-925X-11-82 Text en Copyright ©2012 Yang et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research
Yang, Fan
Qin, Wenjian
Xie, Yaoqin
Wen, Tiexiang
Gu, Jia
A shape-optimized framework for kidney segmentation in ultrasound images using NLTV denoising and DRLSE
title A shape-optimized framework for kidney segmentation in ultrasound images using NLTV denoising and DRLSE
title_full A shape-optimized framework for kidney segmentation in ultrasound images using NLTV denoising and DRLSE
title_fullStr A shape-optimized framework for kidney segmentation in ultrasound images using NLTV denoising and DRLSE
title_full_unstemmed A shape-optimized framework for kidney segmentation in ultrasound images using NLTV denoising and DRLSE
title_short A shape-optimized framework for kidney segmentation in ultrasound images using NLTV denoising and DRLSE
title_sort shape-optimized framework for kidney segmentation in ultrasound images using nltv denoising and drlse
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3585889/
https://www.ncbi.nlm.nih.gov/pubmed/23110664
http://dx.doi.org/10.1186/1475-925X-11-82
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