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Robustness and Backbone Motif of a Cancer Network Regulated by miR-17-92 Cluster during the G1/S Transition

Based on interactions among transcription factors, oncogenes, tumor suppressors and microRNAs, a Boolean model of cancer network regulated by miR-17-92 cluster is constructed, and the network is associated with the control of G1/S transition in the mammalian cell cycle. The robustness properties of...

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Autores principales: Yang, Lijian, Meng, Yan, Bao, Chun, Liu, Wangheng, Ma, Chengzhang, Li, Anbang, Xuan, Zhan, Shan, Ge, Jia, Ya
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3585929/
https://www.ncbi.nlm.nih.gov/pubmed/23469179
http://dx.doi.org/10.1371/journal.pone.0057009
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author Yang, Lijian
Meng, Yan
Bao, Chun
Liu, Wangheng
Ma, Chengzhang
Li, Anbang
Xuan, Zhan
Shan, Ge
Jia, Ya
author_facet Yang, Lijian
Meng, Yan
Bao, Chun
Liu, Wangheng
Ma, Chengzhang
Li, Anbang
Xuan, Zhan
Shan, Ge
Jia, Ya
author_sort Yang, Lijian
collection PubMed
description Based on interactions among transcription factors, oncogenes, tumor suppressors and microRNAs, a Boolean model of cancer network regulated by miR-17-92 cluster is constructed, and the network is associated with the control of G1/S transition in the mammalian cell cycle. The robustness properties of this regulatory network are investigated by virtue of the Boolean network theory. It is found that, during G1/S transition in the cell cycle process, the regulatory networks are robustly constructed, and the robustness property is largely preserved with respect to small perturbations to the network. By using the unique process-based approach, the structure of this network is analyzed. It is shown that the network can be decomposed into a backbone motif which provides the main biological functions, and a remaining motif which makes the regulatory system more stable. The critical role of miR-17-92 in suppressing the G1/S cell cycle checkpoint and increasing the uncontrolled proliferation of the cancer cells by targeting a genetic network of interacting proteins is displayed with our model.
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spelling pubmed-35859292013-03-06 Robustness and Backbone Motif of a Cancer Network Regulated by miR-17-92 Cluster during the G1/S Transition Yang, Lijian Meng, Yan Bao, Chun Liu, Wangheng Ma, Chengzhang Li, Anbang Xuan, Zhan Shan, Ge Jia, Ya PLoS One Research Article Based on interactions among transcription factors, oncogenes, tumor suppressors and microRNAs, a Boolean model of cancer network regulated by miR-17-92 cluster is constructed, and the network is associated with the control of G1/S transition in the mammalian cell cycle. The robustness properties of this regulatory network are investigated by virtue of the Boolean network theory. It is found that, during G1/S transition in the cell cycle process, the regulatory networks are robustly constructed, and the robustness property is largely preserved with respect to small perturbations to the network. By using the unique process-based approach, the structure of this network is analyzed. It is shown that the network can be decomposed into a backbone motif which provides the main biological functions, and a remaining motif which makes the regulatory system more stable. The critical role of miR-17-92 in suppressing the G1/S cell cycle checkpoint and increasing the uncontrolled proliferation of the cancer cells by targeting a genetic network of interacting proteins is displayed with our model. Public Library of Science 2013-03-01 /pmc/articles/PMC3585929/ /pubmed/23469179 http://dx.doi.org/10.1371/journal.pone.0057009 Text en © 2013 Yang et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Yang, Lijian
Meng, Yan
Bao, Chun
Liu, Wangheng
Ma, Chengzhang
Li, Anbang
Xuan, Zhan
Shan, Ge
Jia, Ya
Robustness and Backbone Motif of a Cancer Network Regulated by miR-17-92 Cluster during the G1/S Transition
title Robustness and Backbone Motif of a Cancer Network Regulated by miR-17-92 Cluster during the G1/S Transition
title_full Robustness and Backbone Motif of a Cancer Network Regulated by miR-17-92 Cluster during the G1/S Transition
title_fullStr Robustness and Backbone Motif of a Cancer Network Regulated by miR-17-92 Cluster during the G1/S Transition
title_full_unstemmed Robustness and Backbone Motif of a Cancer Network Regulated by miR-17-92 Cluster during the G1/S Transition
title_short Robustness and Backbone Motif of a Cancer Network Regulated by miR-17-92 Cluster during the G1/S Transition
title_sort robustness and backbone motif of a cancer network regulated by mir-17-92 cluster during the g1/s transition
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3585929/
https://www.ncbi.nlm.nih.gov/pubmed/23469179
http://dx.doi.org/10.1371/journal.pone.0057009
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