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Microarray Analysis of Ageing-related Signatures and Their Expression in Tumors Based on a Computational Biology Approach

Ageing and cancer have been associated with genetic and genomic changes. The identification of common signatures between ageing and cancer can reveal shared molecular mechanisms underlying them. In this study, we collected ageing-related gene signatures from ten published studies involved in six dif...

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Detalles Bibliográficos
Autor principal: Wang, Xiaosheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3586943/
https://www.ncbi.nlm.nih.gov/pubmed/22917186
http://dx.doi.org/10.1016/j.gpb.2012.01.001
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author Wang, Xiaosheng
author_facet Wang, Xiaosheng
author_sort Wang, Xiaosheng
collection PubMed
description Ageing and cancer have been associated with genetic and genomic changes. The identification of common signatures between ageing and cancer can reveal shared molecular mechanisms underlying them. In this study, we collected ageing-related gene signatures from ten published studies involved in six different human tissues and an online resource. We found that most of these gene signatures were tissue-specific and a few were related to multiple tissues. We performed a genome-wide examination of the expression of these signatures in various human tumor types, and found that a large proportion of these signatures were universally differentially expressed among normal vs. tumor phenotypes. Functional analyses of the highly-overlapping genes between ageing and cancer using DAVID tools have identified important functional categories and pathways linking ageing with cancer. The convergent and divergent mechanisms between ageing and cancer are discussed. This study provides insights into the biology of ageing and cancer, suggesting the possibility of potential interventions aimed at postponing ageing and preventing cancer.
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spelling pubmed-35869432013-03-04 Microarray Analysis of Ageing-related Signatures and Their Expression in Tumors Based on a Computational Biology Approach Wang, Xiaosheng Genomics Proteomics Bioinformatics Original Research Ageing and cancer have been associated with genetic and genomic changes. The identification of common signatures between ageing and cancer can reveal shared molecular mechanisms underlying them. In this study, we collected ageing-related gene signatures from ten published studies involved in six different human tissues and an online resource. We found that most of these gene signatures were tissue-specific and a few were related to multiple tissues. We performed a genome-wide examination of the expression of these signatures in various human tumor types, and found that a large proportion of these signatures were universally differentially expressed among normal vs. tumor phenotypes. Functional analyses of the highly-overlapping genes between ageing and cancer using DAVID tools have identified important functional categories and pathways linking ageing with cancer. The convergent and divergent mechanisms between ageing and cancer are discussed. This study provides insights into the biology of ageing and cancer, suggesting the possibility of potential interventions aimed at postponing ageing and preventing cancer. Elsevier 2012-06 2012-06-25 /pmc/articles/PMC3586943/ /pubmed/22917186 http://dx.doi.org/10.1016/j.gpb.2012.01.001 Text en © 2012 Beijing Institute of Genomics, Chinese Academy of Sciences and Genetics Society of China. Published by Elsevier Ltd and Science Press. All rights reserved. http://creativecommons.org/licenses/by-nc-sa/3.0/ This is an open access article under the CC BY-NC-SA license (http://creativecommons.org/licenses/by-nc-sa/3.0/).
spellingShingle Original Research
Wang, Xiaosheng
Microarray Analysis of Ageing-related Signatures and Their Expression in Tumors Based on a Computational Biology Approach
title Microarray Analysis of Ageing-related Signatures and Their Expression in Tumors Based on a Computational Biology Approach
title_full Microarray Analysis of Ageing-related Signatures and Their Expression in Tumors Based on a Computational Biology Approach
title_fullStr Microarray Analysis of Ageing-related Signatures and Their Expression in Tumors Based on a Computational Biology Approach
title_full_unstemmed Microarray Analysis of Ageing-related Signatures and Their Expression in Tumors Based on a Computational Biology Approach
title_short Microarray Analysis of Ageing-related Signatures and Their Expression in Tumors Based on a Computational Biology Approach
title_sort microarray analysis of ageing-related signatures and their expression in tumors based on a computational biology approach
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3586943/
https://www.ncbi.nlm.nih.gov/pubmed/22917186
http://dx.doi.org/10.1016/j.gpb.2012.01.001
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