Cargando…

Impact of genomic structural variation in Drosophila melanogaster based on population-scale sequencing

Genomic structural variation (SV) is a major determinant for phenotypic variation. Although it has been extensively studied in humans, the nucleotide resolution structure of SVs within the widely used model organism Drosophila remains unknown. We report a highly accurate, densely validated map of un...

Descripción completa

Detalles Bibliográficos
Autores principales:	Zichner, Thomas, Garfield, David A., Rausch, Tobias, Stütz, Adrian M., Cannavó, Enrico, Braun, Martina, Furlong, Eileen E.M., Korbel, Jan O.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Cold Spring Harbor Laboratory Press 2013
Materias:	Resource
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3589545/ https://www.ncbi.nlm.nih.gov/pubmed/23222910 http://dx.doi.org/10.1101/gr.142646.112

Ejemplares similares

Natural variation in genome architecture among 205 Drosophila melanogaster Genetic Reference Panel lines
por: Huang, Wen, et al.
Publicado: (2014)

Shadow Enhancers Are Pervasive Features of Developmental Regulatory Networks
por: Cannavò, Enrico, et al.
Publicado: (2016)

The Release 6 reference sequence of the Drosophila melanogaster genome
por: Hoskins, Roger A., et al.
Publicado: (2015)

The developmental proteome of Drosophila melanogaster
por: Casas-Vila, Nuria, et al.
Publicado: (2017)

DELLY: structural variant discovery by integrated paired-end and split-read analysis
por: Rausch, Tobias, et al.
Publicado: (2012)

Diverse patterns of genomic targeting by transcriptional regulators in Drosophila melanogaster
por: Slattery, Matthew, et al.
Publicado: (2014)

DrosOmics: A Browser to Explore -omics Variation Across High-Quality Reference Genomes From Natural Populations of Drosophila melanogaster
por: Coronado-Zamora, Marta, et al.
Publicado: (2023)

Next-generation sequencing-based detection of germline L1-mediated transductions
por: Tica, Jelena, et al.
Publicado: (2016)

Protein manipulation using single copies of short peptide tags in cultured cells and in Drosophila melanogaster
por: Vigano, M. Alessandra, et al.
Publicado: (2021)

Unique transposon landscapes are pervasive across Drosophila melanogaster genomes
por: Rahman, Reazur, et al.
Publicado: (2015)

Large-scale discovery of mouse transgenic integration sites reveals frequent structural variation and insertional mutagenesis
por: Goodwin, Leslie O., et al.
Publicado: (2019)

An Atlas of Transcription Factors Expressed in Male Pupal Terminalia of Drosophila melanogaster
por: Vincent, Ben J., et al.
Publicado: (2019)

Comparative validation of the D. melanogaster modENCODE transcriptome annotation
por: Chen, Zhen-Xia, et al.
Publicado: (2014)

Exploration of fine-scale recombination rate variation in the domestic horse
por: Beeson, Samantha K., et al.
Publicado: (2019)

Identification of tightly regulated groups of genes during Drosophila melanogaster embryogenesis
por: Hooper, Sean D, et al.
Publicado: (2007)

Analysis of Microsatellite Variation in Drosophila melanogaster with Population-Scale Genome Sequencing
por: Fondon, John W., et al.
Publicado: (2012)

Development of a Drosophila melanogaster spliceosensor system for in vivo high-throughput screening in myotonic dystrophy type 1
por: García-Alcover, Irma, et al.
Publicado: (2014)

A high-resolution map of small-scale inversions in the gibbon genome
por: Mercuri, Ludovica, et al.
Publicado: (2022)

The fine-scale recombination rate variation and associations with genomic features in a butterfly
por: Palahí i Torres, Aleix, et al.
Publicado: (2023)

Systematic identification and characterization of repressive domains in Drosophila transcription factors
por: Klaus, Loni, et al.
Publicado: (2022)

The Drosophila brain on cocaine at single-cell resolution
por: Baker, Brandon M., et al.
Publicado: (2021)

Re-annotation of eight Drosophila genomes
por: Yang, Haiwang, et al.
Publicado: (2018)

Genome-Wide Fine-Scale Recombination Rate Variation in Drosophila melanogaster
por: Chan, Andrew H., et al.
Publicado: (2012)

The Genetic Makeup of the Drosophila piRNA Pathway
por: Handler, Dominik, et al.
Publicado: (2013)

Variation Ontology for annotation of variation effects and mechanisms
por: Vihinen, Mauno
Publicado: (2014)

A multi-platform reference for somatic structural variation detection
por: Espejo Valle-Inclan, Jose, et al.
Publicado: (2022)

Gene expression networks in the Drosophila Genetic Reference Panel
por: Everett, Logan J., et al.
Publicado: (2020)

Non-coding RNA Expression, Function, and Variation during Drosophila Embryogenesis
por: Schor, Ignacio E., et al.
Publicado: (2018)

Single Cell RNA-Sequencing of Pluripotent States Unlocks Modular Transcriptional Variation
por: Kolodziejczyk, Aleksandra A., et al.
Publicado: (2015)

Regulation of alternative splicing in Drosophila by 56 RNA binding proteins
por: Brooks, Angela N., et al.
Publicado: (2015)

A Thousand Fly Genomes: An Expanded Drosophila Genome Nexus
por: Lack, Justin B., et al.
Publicado: (2016)

Dissecting morphogenetic apoptosis through a genetic screen in Drosophila
por: Barbaste, Audrey, et al.
Publicado: (2023)

Genetic dissection of a model complex trait using the Drosophila Synthetic Population Resource
por: King, Elizabeth G., et al.
Publicado: (2012)

True Molecular Scale Visualization of Variable Clustering Properties of Ryanodine Receptors
por: Jayasinghe, Izzy, et al.
Publicado: (2018)

Heritable Variation in Courtship Patterns in Drosophila melanogaster
por: Gaertner, Bryn E., et al.
Publicado: (2015)

Highly Efficient Targeted Mutagenesis of Drosophila with the CRISPR/Cas9 System
por: Bassett, Andrew R., et al.
Publicado: (2013)

Natural variation of gene models in Drosophila melanogaster
por: Kurmangaliyev, Yerbol Z, et al.
Publicado: (2015)

Predictive Models of Recombination Rate Variation across the Drosophila melanogaster Genome
por: Adrian, Andrew B., et al.
Publicado: (2016)

Systematic Inference of Copy-Number Genotypes from Personal Genome Sequencing Data Reveals Extensive Olfactory Receptor Gene Content Diversity
por: Waszak, Sebastian M., et al.
Publicado: (2010)

Genetic variation of macronutrient tolerance in Drosophila melanogaster
por: Havula, E., et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_16no3s23i26qogo3r0s8rdknlv