Cargando…
A Genome-Wide Analysis of Populations from European Russia Reveals a New Pole of Genetic Diversity in Northern Europe
Several studies examined the fine-scale structure of human genetic variation in Europe. However, the European sets analyzed represent mainly northern, western, central, and southern Europe. Here, we report an analysis of approximately 166,000 single nucleotide polymorphisms in populations from easte...
Autores principales: | , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3591355/ https://www.ncbi.nlm.nih.gov/pubmed/23505534 http://dx.doi.org/10.1371/journal.pone.0058552 |
_version_ | 1782262038299410432 |
---|---|
author | Khrunin, Andrey V. Khokhrin, Denis V. Filippova, Irina N. Esko, Tõnu Nelis, Mari Bebyakova, Natalia A. Bolotova, Natalia L. Klovins, Janis Nikitina-Zake, Liene Rehnström, Karola Ripatti, Samuli Schreiber, Stefan Franke, Andre Macek, Milan Krulišová, Veronika Lubinski, Jan Metspalu, Andres Limborska, Svetlana A. |
author_facet | Khrunin, Andrey V. Khokhrin, Denis V. Filippova, Irina N. Esko, Tõnu Nelis, Mari Bebyakova, Natalia A. Bolotova, Natalia L. Klovins, Janis Nikitina-Zake, Liene Rehnström, Karola Ripatti, Samuli Schreiber, Stefan Franke, Andre Macek, Milan Krulišová, Veronika Lubinski, Jan Metspalu, Andres Limborska, Svetlana A. |
author_sort | Khrunin, Andrey V. |
collection | PubMed |
description | Several studies examined the fine-scale structure of human genetic variation in Europe. However, the European sets analyzed represent mainly northern, western, central, and southern Europe. Here, we report an analysis of approximately 166,000 single nucleotide polymorphisms in populations from eastern (northeastern) Europe: four Russian populations from European Russia, and three populations from the northernmost Finno-Ugric ethnicities (Veps and two contrast groups of Komi people). These were compared with several reference European samples, including Finns, Estonians, Latvians, Poles, Czechs, Germans, and Italians. The results obtained demonstrated genetic heterogeneity of populations living in the region studied. Russians from the central part of European Russia (Tver, Murom, and Kursk) exhibited similarities with populations from central–eastern Europe, and were distant from Russian sample from the northern Russia (Mezen district, Archangelsk region). Komi samples, especially Izhemski Komi, were significantly different from all other populations studied. These can be considered as a second pole of genetic diversity in northern Europe (in addition to the pole, occupied by Finns), as they had a distinct ancestry component. Russians from Mezen and the Finnic-speaking Veps were positioned between the two poles, but differed from each other in the proportions of Komi and Finnic ancestries. In general, our data provides a more complete genetic map of Europe accounting for the diversity in its most eastern (northeastern) populations. |
format | Online Article Text |
id | pubmed-3591355 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-35913552013-03-15 A Genome-Wide Analysis of Populations from European Russia Reveals a New Pole of Genetic Diversity in Northern Europe Khrunin, Andrey V. Khokhrin, Denis V. Filippova, Irina N. Esko, Tõnu Nelis, Mari Bebyakova, Natalia A. Bolotova, Natalia L. Klovins, Janis Nikitina-Zake, Liene Rehnström, Karola Ripatti, Samuli Schreiber, Stefan Franke, Andre Macek, Milan Krulišová, Veronika Lubinski, Jan Metspalu, Andres Limborska, Svetlana A. PLoS One Research Article Several studies examined the fine-scale structure of human genetic variation in Europe. However, the European sets analyzed represent mainly northern, western, central, and southern Europe. Here, we report an analysis of approximately 166,000 single nucleotide polymorphisms in populations from eastern (northeastern) Europe: four Russian populations from European Russia, and three populations from the northernmost Finno-Ugric ethnicities (Veps and two contrast groups of Komi people). These were compared with several reference European samples, including Finns, Estonians, Latvians, Poles, Czechs, Germans, and Italians. The results obtained demonstrated genetic heterogeneity of populations living in the region studied. Russians from the central part of European Russia (Tver, Murom, and Kursk) exhibited similarities with populations from central–eastern Europe, and were distant from Russian sample from the northern Russia (Mezen district, Archangelsk region). Komi samples, especially Izhemski Komi, were significantly different from all other populations studied. These can be considered as a second pole of genetic diversity in northern Europe (in addition to the pole, occupied by Finns), as they had a distinct ancestry component. Russians from Mezen and the Finnic-speaking Veps were positioned between the two poles, but differed from each other in the proportions of Komi and Finnic ancestries. In general, our data provides a more complete genetic map of Europe accounting for the diversity in its most eastern (northeastern) populations. Public Library of Science 2013-03-07 /pmc/articles/PMC3591355/ /pubmed/23505534 http://dx.doi.org/10.1371/journal.pone.0058552 Text en © 2013 Khrunin et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Khrunin, Andrey V. Khokhrin, Denis V. Filippova, Irina N. Esko, Tõnu Nelis, Mari Bebyakova, Natalia A. Bolotova, Natalia L. Klovins, Janis Nikitina-Zake, Liene Rehnström, Karola Ripatti, Samuli Schreiber, Stefan Franke, Andre Macek, Milan Krulišová, Veronika Lubinski, Jan Metspalu, Andres Limborska, Svetlana A. A Genome-Wide Analysis of Populations from European Russia Reveals a New Pole of Genetic Diversity in Northern Europe |
title | A Genome-Wide Analysis of Populations from European Russia Reveals a New Pole of Genetic Diversity in Northern Europe |
title_full | A Genome-Wide Analysis of Populations from European Russia Reveals a New Pole of Genetic Diversity in Northern Europe |
title_fullStr | A Genome-Wide Analysis of Populations from European Russia Reveals a New Pole of Genetic Diversity in Northern Europe |
title_full_unstemmed | A Genome-Wide Analysis of Populations from European Russia Reveals a New Pole of Genetic Diversity in Northern Europe |
title_short | A Genome-Wide Analysis of Populations from European Russia Reveals a New Pole of Genetic Diversity in Northern Europe |
title_sort | genome-wide analysis of populations from european russia reveals a new pole of genetic diversity in northern europe |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3591355/ https://www.ncbi.nlm.nih.gov/pubmed/23505534 http://dx.doi.org/10.1371/journal.pone.0058552 |
work_keys_str_mv | AT khruninandreyv agenomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT khokhrindenisv agenomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT filippovairinan agenomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT eskotonu agenomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT nelismari agenomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT bebyakovanataliaa agenomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT bolotovanatalial agenomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT klovinsjanis agenomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT nikitinazakeliene agenomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT rehnstromkarola agenomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT ripattisamuli agenomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT schreiberstefan agenomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT frankeandre agenomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT macekmilan agenomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT krulisovaveronika agenomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT lubinskijan agenomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT metspaluandres agenomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT limborskasvetlanaa agenomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT khruninandreyv genomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT khokhrindenisv genomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT filippovairinan genomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT eskotonu genomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT nelismari genomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT bebyakovanataliaa genomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT bolotovanatalial genomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT klovinsjanis genomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT nikitinazakeliene genomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT rehnstromkarola genomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT ripattisamuli genomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT schreiberstefan genomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT frankeandre genomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT macekmilan genomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT krulisovaveronika genomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT lubinskijan genomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT metspaluandres genomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope AT limborskasvetlanaa genomewideanalysisofpopulationsfromeuropeanrussiarevealsanewpoleofgeneticdiversityinnortherneurope |