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Composition-based classification of short metagenomic sequences elucidates the landscapes of taxonomic and functional enrichment of microorganisms
Compared with traditional algorithms for long metagenomic sequence classification, characterizing microorganisms’ taxonomic and functional abundance based on tens of millions of very short reads are much more challenging. We describe an efficient composition and phylogeny-based algorithm [Metagenome...
Autores principales: | Liu, Jiemeng, Wang, Haifeng, Yang, Hongxing, Zhang, Yizhe, Wang, Jinfeng, Zhao, Fangqing, Qi, Ji |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3592448/ https://www.ncbi.nlm.nih.gov/pubmed/22941634 http://dx.doi.org/10.1093/nar/gks828 |
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