Whole-Genome Sequence of a Freshwater Aerobic Anoxygenic Phototroph, Porphyrobacter sp. Strain AAP82, Isolated from the Huguangyan Maar Lake in Southern China

The Porphyrobacter genus (of the class Alphaproteobacteria) contains aerobic anoxygenic phototrophic species. Here we report a draft genome sequence of a freshwater bacterium, Porphyrobacter sp. strain AAP82. It contains a 38-kb-long photosynthesis gene cluster, but carbon-fixation genes are absent....

Descripción completa

Detalles Bibliográficos
Autores principales: Li, Xiuling, Koblížek, Michal, Feng, Fuying, Li, Yunxu, Jian, Jichang, Zeng, Yonghui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2013
Materias:
Prokaryotes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3593325/
https://www.ncbi.nlm.nih.gov/pubmed/23516203
http://dx.doi.org/10.1128/genomeA.00072-13
_version_ 1782262243811917824
author Li, Xiuling
Koblížek, Michal
Feng, Fuying
Li, Yunxu
Jian, Jichang
Zeng, Yonghui
author_facet Li, Xiuling
Koblížek, Michal
Feng, Fuying
Li, Yunxu
Jian, Jichang
Zeng, Yonghui
author_sort Li, Xiuling
collection PubMed
description The Porphyrobacter genus (of the class Alphaproteobacteria) contains aerobic anoxygenic phototrophic species. Here we report a draft genome sequence of a freshwater bacterium, Porphyrobacter sp. strain AAP82. It contains a 38-kb-long photosynthesis gene cluster, but carbon-fixation genes are absent. The presence of respiratory enzymes, tricarboxylic acid (TCA) cycle, and the Entner-Doudoroff pathway demonstrates its aerobic photoorganotrophic character.
format Online
Article
Text
id pubmed-3593325
institution National Center for Biotechnology Information
language English
publishDate 2013
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-35933252013-03-12 Whole-Genome Sequence of a Freshwater Aerobic Anoxygenic Phototroph, Porphyrobacter sp. Strain AAP82, Isolated from the Huguangyan Maar Lake in Southern China Li, Xiuling Koblížek, Michal Feng, Fuying Li, Yunxu Jian, Jichang Zeng, Yonghui Genome Announc Prokaryotes The Porphyrobacter genus (of the class Alphaproteobacteria) contains aerobic anoxygenic phototrophic species. Here we report a draft genome sequence of a freshwater bacterium, Porphyrobacter sp. strain AAP82. It contains a 38-kb-long photosynthesis gene cluster, but carbon-fixation genes are absent. The presence of respiratory enzymes, tricarboxylic acid (TCA) cycle, and the Entner-Doudoroff pathway demonstrates its aerobic photoorganotrophic character. American Society for Microbiology 2013-03-07 /pmc/articles/PMC3593325/ /pubmed/23516203 http://dx.doi.org/10.1128/genomeA.00072-13 Text en Copyright © 2013 Li et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 3.0 Unported license (http://creativecommons.org/licenses/by/3.0/) .
spellingShingle Prokaryotes
Li, Xiuling
Koblížek, Michal
Feng, Fuying
Li, Yunxu
Jian, Jichang
Zeng, Yonghui
Whole-Genome Sequence of a Freshwater Aerobic Anoxygenic Phototroph, Porphyrobacter sp. Strain AAP82, Isolated from the Huguangyan Maar Lake in Southern China
title Whole-Genome Sequence of a Freshwater Aerobic Anoxygenic Phototroph, Porphyrobacter sp. Strain AAP82, Isolated from the Huguangyan Maar Lake in Southern China
title_full Whole-Genome Sequence of a Freshwater Aerobic Anoxygenic Phototroph, Porphyrobacter sp. Strain AAP82, Isolated from the Huguangyan Maar Lake in Southern China
title_fullStr Whole-Genome Sequence of a Freshwater Aerobic Anoxygenic Phototroph, Porphyrobacter sp. Strain AAP82, Isolated from the Huguangyan Maar Lake in Southern China
title_full_unstemmed Whole-Genome Sequence of a Freshwater Aerobic Anoxygenic Phototroph, Porphyrobacter sp. Strain AAP82, Isolated from the Huguangyan Maar Lake in Southern China
title_short Whole-Genome Sequence of a Freshwater Aerobic Anoxygenic Phototroph, Porphyrobacter sp. Strain AAP82, Isolated from the Huguangyan Maar Lake in Southern China
title_sort whole-genome sequence of a freshwater aerobic anoxygenic phototroph, porphyrobacter sp. strain aap82, isolated from the huguangyan maar lake in southern china
topic Prokaryotes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3593325/
https://www.ncbi.nlm.nih.gov/pubmed/23516203
http://dx.doi.org/10.1128/genomeA.00072-13
work_keys_str_mv AT lixiuling wholegenomesequenceofafreshwateraerobicanoxygenicphototrophporphyrobacterspstrainaap82isolatedfromthehuguangyanmaarlakeinsouthernchina
AT koblizekmichal wholegenomesequenceofafreshwateraerobicanoxygenicphototrophporphyrobacterspstrainaap82isolatedfromthehuguangyanmaarlakeinsouthernchina
AT fengfuying wholegenomesequenceofafreshwateraerobicanoxygenicphototrophporphyrobacterspstrainaap82isolatedfromthehuguangyanmaarlakeinsouthernchina
AT liyunxu wholegenomesequenceofafreshwateraerobicanoxygenicphototrophporphyrobacterspstrainaap82isolatedfromthehuguangyanmaarlakeinsouthernchina
AT jianjichang wholegenomesequenceofafreshwateraerobicanoxygenicphototrophporphyrobacterspstrainaap82isolatedfromthehuguangyanmaarlakeinsouthernchina
AT zengyonghui wholegenomesequenceofafreshwateraerobicanoxygenicphototrophporphyrobacterspstrainaap82isolatedfromthehuguangyanmaarlakeinsouthernchina

Ejemplares similares