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A Genome-Wide Association Study for Primary Open Angle Glaucoma and Macular Degeneration Reveals Novel Loci

Glaucoma and age-related macular degeneration (AMD) are the two leading causes of visual loss in the United States. We utilized a novel study design to perform a genome-wide association for both primary open angle glaucoma (POAG) and AMD. This study design utilized a two-stage process for hypothesis...

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Autores principales: Scheetz, Todd E., Fingert, John H., Wang, Kai, Kuehn, Markus H., Knudtson, Kevin L., Alward, Wallace L. M., Boldt, H. Culver, Russell, Stephen R., Folk, James C., Casavant, Thomas L., Braun, Terry A., Clark, Abbot F., Stone, Edwin M., Sheffield, Val C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3594156/
https://www.ncbi.nlm.nih.gov/pubmed/23536807
http://dx.doi.org/10.1371/journal.pone.0058657
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author Scheetz, Todd E.
Fingert, John H.
Wang, Kai
Kuehn, Markus H.
Knudtson, Kevin L.
Alward, Wallace L. M.
Boldt, H. Culver
Russell, Stephen R.
Folk, James C.
Casavant, Thomas L.
Braun, Terry A.
Clark, Abbot F.
Stone, Edwin M.
Sheffield, Val C.
author_facet Scheetz, Todd E.
Fingert, John H.
Wang, Kai
Kuehn, Markus H.
Knudtson, Kevin L.
Alward, Wallace L. M.
Boldt, H. Culver
Russell, Stephen R.
Folk, James C.
Casavant, Thomas L.
Braun, Terry A.
Clark, Abbot F.
Stone, Edwin M.
Sheffield, Val C.
author_sort Scheetz, Todd E.
collection PubMed
description Glaucoma and age-related macular degeneration (AMD) are the two leading causes of visual loss in the United States. We utilized a novel study design to perform a genome-wide association for both primary open angle glaucoma (POAG) and AMD. This study design utilized a two-stage process for hypothesis generation and validation, in which each disease cohort was utilized as a control for the other. A total of 400 POAG patients and 400 AMD patients were ascertained and genotyped at 500,000 loci. This study identified a novel association of complement component 7 (C7) to POAG. Additionally, an association of central corneal thickness, a known risk factor for POAG, was found to be associated with ribophorin II (RPN2). Linked monogenic loci for POAG and AMD were also evaluated for evidence of association, none of which were found to be significantly associated. However, several yielded putative associations requiring validation. Our data suggest that POAG is more genetically complex than AMD, with no common risk alleles of large effect.
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spelling pubmed-35941562013-03-27 A Genome-Wide Association Study for Primary Open Angle Glaucoma and Macular Degeneration Reveals Novel Loci Scheetz, Todd E. Fingert, John H. Wang, Kai Kuehn, Markus H. Knudtson, Kevin L. Alward, Wallace L. M. Boldt, H. Culver Russell, Stephen R. Folk, James C. Casavant, Thomas L. Braun, Terry A. Clark, Abbot F. Stone, Edwin M. Sheffield, Val C. PLoS One Research Article Glaucoma and age-related macular degeneration (AMD) are the two leading causes of visual loss in the United States. We utilized a novel study design to perform a genome-wide association for both primary open angle glaucoma (POAG) and AMD. This study design utilized a two-stage process for hypothesis generation and validation, in which each disease cohort was utilized as a control for the other. A total of 400 POAG patients and 400 AMD patients were ascertained and genotyped at 500,000 loci. This study identified a novel association of complement component 7 (C7) to POAG. Additionally, an association of central corneal thickness, a known risk factor for POAG, was found to be associated with ribophorin II (RPN2). Linked monogenic loci for POAG and AMD were also evaluated for evidence of association, none of which were found to be significantly associated. However, several yielded putative associations requiring validation. Our data suggest that POAG is more genetically complex than AMD, with no common risk alleles of large effect. Public Library of Science 2013-03-11 /pmc/articles/PMC3594156/ /pubmed/23536807 http://dx.doi.org/10.1371/journal.pone.0058657 Text en © 2013 Scheetz et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Scheetz, Todd E.
Fingert, John H.
Wang, Kai
Kuehn, Markus H.
Knudtson, Kevin L.
Alward, Wallace L. M.
Boldt, H. Culver
Russell, Stephen R.
Folk, James C.
Casavant, Thomas L.
Braun, Terry A.
Clark, Abbot F.
Stone, Edwin M.
Sheffield, Val C.
A Genome-Wide Association Study for Primary Open Angle Glaucoma and Macular Degeneration Reveals Novel Loci
title A Genome-Wide Association Study for Primary Open Angle Glaucoma and Macular Degeneration Reveals Novel Loci
title_full A Genome-Wide Association Study for Primary Open Angle Glaucoma and Macular Degeneration Reveals Novel Loci
title_fullStr A Genome-Wide Association Study for Primary Open Angle Glaucoma and Macular Degeneration Reveals Novel Loci
title_full_unstemmed A Genome-Wide Association Study for Primary Open Angle Glaucoma and Macular Degeneration Reveals Novel Loci
title_short A Genome-Wide Association Study for Primary Open Angle Glaucoma and Macular Degeneration Reveals Novel Loci
title_sort genome-wide association study for primary open angle glaucoma and macular degeneration reveals novel loci
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3594156/
https://www.ncbi.nlm.nih.gov/pubmed/23536807
http://dx.doi.org/10.1371/journal.pone.0058657
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