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Genetic Variants of MICB and PLCE1 and Associations with Non-Severe Dengue
BACKGROUND: A recent genome-wide association study (GWAS) identified susceptibility loci for dengue shock syndrome (DSS) at MICB rs3132468 and PLCE1 rs3740360. The aim of this study was to define the extent to which MICB (rs3132468) and PLCE1 (rs3740360) were associated with less severe clinical phe...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3594159/ https://www.ncbi.nlm.nih.gov/pubmed/23536857 http://dx.doi.org/10.1371/journal.pone.0059067 |
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author | Whitehorn, James Chau, Tran Nguyen Bich Nguyet, Nguyen Minh Kien, Duong Thi Hue Quyen, Nguyen Than Ha Trung, Dinh The Pang, Junxiong Wills, Bridget Van Vinh Chau, Nguyen Farrar, Jeremy Hibberd, Martin L. Khor, Chiea Chuen Simmons, Cameron P. |
author_facet | Whitehorn, James Chau, Tran Nguyen Bich Nguyet, Nguyen Minh Kien, Duong Thi Hue Quyen, Nguyen Than Ha Trung, Dinh The Pang, Junxiong Wills, Bridget Van Vinh Chau, Nguyen Farrar, Jeremy Hibberd, Martin L. Khor, Chiea Chuen Simmons, Cameron P. |
author_sort | Whitehorn, James |
collection | PubMed |
description | BACKGROUND: A recent genome-wide association study (GWAS) identified susceptibility loci for dengue shock syndrome (DSS) at MICB rs3132468 and PLCE1 rs3740360. The aim of this study was to define the extent to which MICB (rs3132468) and PLCE1 (rs3740360) were associated with less severe clinical phenotypes of pediatric and adult dengue. METHODS: 3961 laboratory-confirmed dengue cases and 5968 controls were genotyped at MICB rs3132468 and PLCE1 rs3740360. Per-allele odds ratios (OR) with 95% confidence intervals (CI) were calculated for each patient cohort. Pooled analyses were performed for adults and paediatrics respectively using a fixed effects model. RESULTS: Pooled analysis of the paediatric and adult cohorts indicated a significant association between MICB rs3132468 and dengue cases without shock (OR = 1.15; 95%CI: 1.07 – 1.24; P = 0.0012). Similarly, pooled analysis of pediatric and adult cohorts indicated a significant association between dengue cases without shock and PLCE1 rs3740360 (OR = 0.92; 95%CI: 0.85 – 0.99; P = 0.018). We also note significant association between both SNPs (OR = 1.48; P = 0.0075 for MICB rs3132468 and OR = 0.75, P = 0.041 for PLCE1 rs3740360) and dengue in infants. DISCUSSION: This study confirms that the MICB rs3132468 and PLCE1 rs3740360 risk genotypes are not only associated with DSS, but are also associated with less severe clinical phenotypes of dengue, as well as with dengue in infants. These findings have implications for our understanding of dengue pathogenesis. |
format | Online Article Text |
id | pubmed-3594159 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-35941592013-03-27 Genetic Variants of MICB and PLCE1 and Associations with Non-Severe Dengue Whitehorn, James Chau, Tran Nguyen Bich Nguyet, Nguyen Minh Kien, Duong Thi Hue Quyen, Nguyen Than Ha Trung, Dinh The Pang, Junxiong Wills, Bridget Van Vinh Chau, Nguyen Farrar, Jeremy Hibberd, Martin L. Khor, Chiea Chuen Simmons, Cameron P. PLoS One Research Article BACKGROUND: A recent genome-wide association study (GWAS) identified susceptibility loci for dengue shock syndrome (DSS) at MICB rs3132468 and PLCE1 rs3740360. The aim of this study was to define the extent to which MICB (rs3132468) and PLCE1 (rs3740360) were associated with less severe clinical phenotypes of pediatric and adult dengue. METHODS: 3961 laboratory-confirmed dengue cases and 5968 controls were genotyped at MICB rs3132468 and PLCE1 rs3740360. Per-allele odds ratios (OR) with 95% confidence intervals (CI) were calculated for each patient cohort. Pooled analyses were performed for adults and paediatrics respectively using a fixed effects model. RESULTS: Pooled analysis of the paediatric and adult cohorts indicated a significant association between MICB rs3132468 and dengue cases without shock (OR = 1.15; 95%CI: 1.07 – 1.24; P = 0.0012). Similarly, pooled analysis of pediatric and adult cohorts indicated a significant association between dengue cases without shock and PLCE1 rs3740360 (OR = 0.92; 95%CI: 0.85 – 0.99; P = 0.018). We also note significant association between both SNPs (OR = 1.48; P = 0.0075 for MICB rs3132468 and OR = 0.75, P = 0.041 for PLCE1 rs3740360) and dengue in infants. DISCUSSION: This study confirms that the MICB rs3132468 and PLCE1 rs3740360 risk genotypes are not only associated with DSS, but are also associated with less severe clinical phenotypes of dengue, as well as with dengue in infants. These findings have implications for our understanding of dengue pathogenesis. Public Library of Science 2013-03-11 /pmc/articles/PMC3594159/ /pubmed/23536857 http://dx.doi.org/10.1371/journal.pone.0059067 Text en © 2013 Whitehorn et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Whitehorn, James Chau, Tran Nguyen Bich Nguyet, Nguyen Minh Kien, Duong Thi Hue Quyen, Nguyen Than Ha Trung, Dinh The Pang, Junxiong Wills, Bridget Van Vinh Chau, Nguyen Farrar, Jeremy Hibberd, Martin L. Khor, Chiea Chuen Simmons, Cameron P. Genetic Variants of MICB and PLCE1 and Associations with Non-Severe Dengue |
title | Genetic Variants of MICB and PLCE1 and Associations with Non-Severe Dengue |
title_full | Genetic Variants of MICB and PLCE1 and Associations with Non-Severe Dengue |
title_fullStr | Genetic Variants of MICB and PLCE1 and Associations with Non-Severe Dengue |
title_full_unstemmed | Genetic Variants of MICB and PLCE1 and Associations with Non-Severe Dengue |
title_short | Genetic Variants of MICB and PLCE1 and Associations with Non-Severe Dengue |
title_sort | genetic variants of micb and plce1 and associations with non-severe dengue |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3594159/ https://www.ncbi.nlm.nih.gov/pubmed/23536857 http://dx.doi.org/10.1371/journal.pone.0059067 |
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