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Genetic variants associated with circulating MMP1 levels near matrix metalloproteinase genes on chromosome 11q21-22 in Taiwanese: interaction with obesity
BACKGROUND: MMP1 is implicated in the pathogenesis of atherothrombotic cardiovascular disease. We aimed to elucidate genetic determinants of inflammatory marker levels, including circulating MMP1, in Taiwanese, and their association with obesity. METHODS: Five genetic polymorphisms around matrix met...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3599409/ https://www.ncbi.nlm.nih.gov/pubmed/23497408 http://dx.doi.org/10.1186/1471-2350-14-30 |
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author | Huang, Hsuan-Li Wu, Semon Hsu, Lung-An Teng, Ming-Sheng Lin, Jeng-Feng Sun, Yu-Chen Ko, Yu-Lin |
author_facet | Huang, Hsuan-Li Wu, Semon Hsu, Lung-An Teng, Ming-Sheng Lin, Jeng-Feng Sun, Yu-Chen Ko, Yu-Lin |
author_sort | Huang, Hsuan-Li |
collection | PubMed |
description | BACKGROUND: MMP1 is implicated in the pathogenesis of atherothrombotic cardiovascular disease. We aimed to elucidate genetic determinants of inflammatory marker levels, including circulating MMP1, in Taiwanese, and their association with obesity. METHODS: Five genetic polymorphisms around matrix metalloproteinase genes on chromosome 11q21-22 region were genotyped in 519 subjects. RESULTS: After adjusting for clinical covariates, two polymorphisms were significantly associated with MMP1 levels, rs1799750 and rs495366, using an additive inheritance model (P = 1.5x10(-4) and P = 2.57x10(-5), respectively). Using dominant model, minor alleles of rs1799750 and rs495366 were associated with higher MMP1 levels (P = 1.3x10(-4) and P = 1.95x10(-5), respectively). In haplotype analysis, two haplotypes inferred from five SNPs (A2GATA and A1GATG) were associated with MMP1 levels (P = 5x10(-4) and P = 8.47x10(-5), respectively). Subgroup and interaction analysis revealed an association of rs1799750 and rs495366 with MMP1 levels only in non-obese subjects (P = 6.66x10(-6) and P = 4.38x10(-5), respectively, and interaction P = 0.008 for rs1799750). Haplotype interaction analysis also showed significant interaction for haplotype A1GATG (interaction P = 0.003). CONCLUSIONS: Genotypes/haplotypes around MMP1 locus are associated with MMP1 levels in Taiwanese. Further, since genotypes/haplotypes near MMP1 locus interact with obesity to set MMP1 levels, genetic determinants for MMP1 level may be different between obese and non-obese individuals. |
format | Online Article Text |
id | pubmed-3599409 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-35994092013-03-17 Genetic variants associated with circulating MMP1 levels near matrix metalloproteinase genes on chromosome 11q21-22 in Taiwanese: interaction with obesity Huang, Hsuan-Li Wu, Semon Hsu, Lung-An Teng, Ming-Sheng Lin, Jeng-Feng Sun, Yu-Chen Ko, Yu-Lin BMC Med Genet Research Article BACKGROUND: MMP1 is implicated in the pathogenesis of atherothrombotic cardiovascular disease. We aimed to elucidate genetic determinants of inflammatory marker levels, including circulating MMP1, in Taiwanese, and their association with obesity. METHODS: Five genetic polymorphisms around matrix metalloproteinase genes on chromosome 11q21-22 region were genotyped in 519 subjects. RESULTS: After adjusting for clinical covariates, two polymorphisms were significantly associated with MMP1 levels, rs1799750 and rs495366, using an additive inheritance model (P = 1.5x10(-4) and P = 2.57x10(-5), respectively). Using dominant model, minor alleles of rs1799750 and rs495366 were associated with higher MMP1 levels (P = 1.3x10(-4) and P = 1.95x10(-5), respectively). In haplotype analysis, two haplotypes inferred from five SNPs (A2GATA and A1GATG) were associated with MMP1 levels (P = 5x10(-4) and P = 8.47x10(-5), respectively). Subgroup and interaction analysis revealed an association of rs1799750 and rs495366 with MMP1 levels only in non-obese subjects (P = 6.66x10(-6) and P = 4.38x10(-5), respectively, and interaction P = 0.008 for rs1799750). Haplotype interaction analysis also showed significant interaction for haplotype A1GATG (interaction P = 0.003). CONCLUSIONS: Genotypes/haplotypes around MMP1 locus are associated with MMP1 levels in Taiwanese. Further, since genotypes/haplotypes near MMP1 locus interact with obesity to set MMP1 levels, genetic determinants for MMP1 level may be different between obese and non-obese individuals. BioMed Central 2013-03-04 /pmc/articles/PMC3599409/ /pubmed/23497408 http://dx.doi.org/10.1186/1471-2350-14-30 Text en Copyright ©2013 Huang et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Huang, Hsuan-Li Wu, Semon Hsu, Lung-An Teng, Ming-Sheng Lin, Jeng-Feng Sun, Yu-Chen Ko, Yu-Lin Genetic variants associated with circulating MMP1 levels near matrix metalloproteinase genes on chromosome 11q21-22 in Taiwanese: interaction with obesity |
title | Genetic variants associated with circulating MMP1 levels near matrix metalloproteinase genes on chromosome 11q21-22 in Taiwanese: interaction with obesity |
title_full | Genetic variants associated with circulating MMP1 levels near matrix metalloproteinase genes on chromosome 11q21-22 in Taiwanese: interaction with obesity |
title_fullStr | Genetic variants associated with circulating MMP1 levels near matrix metalloproteinase genes on chromosome 11q21-22 in Taiwanese: interaction with obesity |
title_full_unstemmed | Genetic variants associated with circulating MMP1 levels near matrix metalloproteinase genes on chromosome 11q21-22 in Taiwanese: interaction with obesity |
title_short | Genetic variants associated with circulating MMP1 levels near matrix metalloproteinase genes on chromosome 11q21-22 in Taiwanese: interaction with obesity |
title_sort | genetic variants associated with circulating mmp1 levels near matrix metalloproteinase genes on chromosome 11q21-22 in taiwanese: interaction with obesity |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3599409/ https://www.ncbi.nlm.nih.gov/pubmed/23497408 http://dx.doi.org/10.1186/1471-2350-14-30 |
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