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Diversified pattern of the human colorectal cancer microbiome
BACKGROUND: The aim of this study is to expand existing knowledge about the CRC-associated microbiome among Han Chinese, and to further discover the variation pattern of the human CRC microbiome across all population. FINDINGS: Using pyrosequencing-based molecular monitoring of bacterial 16S rRNA ge...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3599420/ https://www.ncbi.nlm.nih.gov/pubmed/23497613 http://dx.doi.org/10.1186/1757-4749-5-2 |
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author | Geng, Jiawei Fan, Hong Tang, Xiaodan Zhai, Huiqin Zhang, Zhigang |
author_facet | Geng, Jiawei Fan, Hong Tang, Xiaodan Zhai, Huiqin Zhang, Zhigang |
author_sort | Geng, Jiawei |
collection | PubMed |
description | BACKGROUND: The aim of this study is to expand existing knowledge about the CRC-associated microbiome among Han Chinese, and to further discover the variation pattern of the human CRC microbiome across all population. FINDINGS: Using pyrosequencing-based molecular monitoring of bacterial 16S rRNA gene from eight tumor/normal tissue pairs of eight Chinese CRC patients, we analyzed and characterized the basic features of the CRC-associated microbiome. Firstly, we discovered an increasing diversity among tumor-associated bacterial communities. Secondly, in 50% of Chinese CRC patients, we found a significant increase of Roseburia (P = 0.017), and a concurrent decrease of both Microbacterium (P = 0.009) and Anoxybacillus (P = 0.009) in tumor tissue. CONCLUSIONS: We discovered a novel CRC microbiome pattern in Chinese. Both the over-represented Roseburia bacteria at tumor sites and the over-represented Microbacterium and Anoxybacillus bacteria away from tumor sites were both closely related in Chinese CRC patients. Across several populations reported in this study and previously, we observed both common and distinctive patterns of human CRC microbiome’s association with a high-risk of CRC. |
format | Online Article Text |
id | pubmed-3599420 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-35994202013-03-17 Diversified pattern of the human colorectal cancer microbiome Geng, Jiawei Fan, Hong Tang, Xiaodan Zhai, Huiqin Zhang, Zhigang Gut Pathog Short Report BACKGROUND: The aim of this study is to expand existing knowledge about the CRC-associated microbiome among Han Chinese, and to further discover the variation pattern of the human CRC microbiome across all population. FINDINGS: Using pyrosequencing-based molecular monitoring of bacterial 16S rRNA gene from eight tumor/normal tissue pairs of eight Chinese CRC patients, we analyzed and characterized the basic features of the CRC-associated microbiome. Firstly, we discovered an increasing diversity among tumor-associated bacterial communities. Secondly, in 50% of Chinese CRC patients, we found a significant increase of Roseburia (P = 0.017), and a concurrent decrease of both Microbacterium (P = 0.009) and Anoxybacillus (P = 0.009) in tumor tissue. CONCLUSIONS: We discovered a novel CRC microbiome pattern in Chinese. Both the over-represented Roseburia bacteria at tumor sites and the over-represented Microbacterium and Anoxybacillus bacteria away from tumor sites were both closely related in Chinese CRC patients. Across several populations reported in this study and previously, we observed both common and distinctive patterns of human CRC microbiome’s association with a high-risk of CRC. BioMed Central 2013-03-07 /pmc/articles/PMC3599420/ /pubmed/23497613 http://dx.doi.org/10.1186/1757-4749-5-2 Text en Copyright ©2013 Geng et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Report Geng, Jiawei Fan, Hong Tang, Xiaodan Zhai, Huiqin Zhang, Zhigang Diversified pattern of the human colorectal cancer microbiome |
title | Diversified pattern of the human colorectal cancer microbiome |
title_full | Diversified pattern of the human colorectal cancer microbiome |
title_fullStr | Diversified pattern of the human colorectal cancer microbiome |
title_full_unstemmed | Diversified pattern of the human colorectal cancer microbiome |
title_short | Diversified pattern of the human colorectal cancer microbiome |
title_sort | diversified pattern of the human colorectal cancer microbiome |
topic | Short Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3599420/ https://www.ncbi.nlm.nih.gov/pubmed/23497613 http://dx.doi.org/10.1186/1757-4749-5-2 |
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