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Diversified pattern of the human colorectal cancer microbiome

BACKGROUND: The aim of this study is to expand existing knowledge about the CRC-associated microbiome among Han Chinese, and to further discover the variation pattern of the human CRC microbiome across all population. FINDINGS: Using pyrosequencing-based molecular monitoring of bacterial 16S rRNA ge...

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Autores principales: Geng, Jiawei, Fan, Hong, Tang, Xiaodan, Zhai, Huiqin, Zhang, Zhigang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3599420/
https://www.ncbi.nlm.nih.gov/pubmed/23497613
http://dx.doi.org/10.1186/1757-4749-5-2
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author Geng, Jiawei
Fan, Hong
Tang, Xiaodan
Zhai, Huiqin
Zhang, Zhigang
author_facet Geng, Jiawei
Fan, Hong
Tang, Xiaodan
Zhai, Huiqin
Zhang, Zhigang
author_sort Geng, Jiawei
collection PubMed
description BACKGROUND: The aim of this study is to expand existing knowledge about the CRC-associated microbiome among Han Chinese, and to further discover the variation pattern of the human CRC microbiome across all population. FINDINGS: Using pyrosequencing-based molecular monitoring of bacterial 16S rRNA gene from eight tumor/normal tissue pairs of eight Chinese CRC patients, we analyzed and characterized the basic features of the CRC-associated microbiome. Firstly, we discovered an increasing diversity among tumor-associated bacterial communities. Secondly, in 50% of Chinese CRC patients, we found a significant increase of Roseburia (P = 0.017), and a concurrent decrease of both Microbacterium (P = 0.009) and Anoxybacillus (P = 0.009) in tumor tissue. CONCLUSIONS: We discovered a novel CRC microbiome pattern in Chinese. Both the over-represented Roseburia bacteria at tumor sites and the over-represented Microbacterium and Anoxybacillus bacteria away from tumor sites were both closely related in Chinese CRC patients. Across several populations reported in this study and previously, we observed both common and distinctive patterns of human CRC microbiome’s association with a high-risk of CRC.
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spelling pubmed-35994202013-03-17 Diversified pattern of the human colorectal cancer microbiome Geng, Jiawei Fan, Hong Tang, Xiaodan Zhai, Huiqin Zhang, Zhigang Gut Pathog Short Report BACKGROUND: The aim of this study is to expand existing knowledge about the CRC-associated microbiome among Han Chinese, and to further discover the variation pattern of the human CRC microbiome across all population. FINDINGS: Using pyrosequencing-based molecular monitoring of bacterial 16S rRNA gene from eight tumor/normal tissue pairs of eight Chinese CRC patients, we analyzed and characterized the basic features of the CRC-associated microbiome. Firstly, we discovered an increasing diversity among tumor-associated bacterial communities. Secondly, in 50% of Chinese CRC patients, we found a significant increase of Roseburia (P = 0.017), and a concurrent decrease of both Microbacterium (P = 0.009) and Anoxybacillus (P = 0.009) in tumor tissue. CONCLUSIONS: We discovered a novel CRC microbiome pattern in Chinese. Both the over-represented Roseburia bacteria at tumor sites and the over-represented Microbacterium and Anoxybacillus bacteria away from tumor sites were both closely related in Chinese CRC patients. Across several populations reported in this study and previously, we observed both common and distinctive patterns of human CRC microbiome’s association with a high-risk of CRC. BioMed Central 2013-03-07 /pmc/articles/PMC3599420/ /pubmed/23497613 http://dx.doi.org/10.1186/1757-4749-5-2 Text en Copyright ©2013 Geng et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Report
Geng, Jiawei
Fan, Hong
Tang, Xiaodan
Zhai, Huiqin
Zhang, Zhigang
Diversified pattern of the human colorectal cancer microbiome
title Diversified pattern of the human colorectal cancer microbiome
title_full Diversified pattern of the human colorectal cancer microbiome
title_fullStr Diversified pattern of the human colorectal cancer microbiome
title_full_unstemmed Diversified pattern of the human colorectal cancer microbiome
title_short Diversified pattern of the human colorectal cancer microbiome
title_sort diversified pattern of the human colorectal cancer microbiome
topic Short Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3599420/
https://www.ncbi.nlm.nih.gov/pubmed/23497613
http://dx.doi.org/10.1186/1757-4749-5-2
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