Cargando…

Automatic Segmentation of Lung Carcinoma Using 3D Texture Features in 18-FDG PET/CT

Target definition is the largest source of geometric uncertainty in radiation therapy. This is partly due to a lack of contrast between tumor and healthy soft tissue for computed tomography (CT) and due to blurriness, lower spatial resolution, and lack of a truly quantitative unit for positron emiss...

Descripción completa

Detalles Bibliográficos
Autores principales: Markel, Daniel, Caldwell, Curtis, Alasti, Hamideh, Soliman, Hany, Ung, Yee, Lee, Justin, Sun, Alexander
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3600349/
https://www.ncbi.nlm.nih.gov/pubmed/23533750
http://dx.doi.org/10.1155/2013/980769
_version_ 1782475636440301568
author Markel, Daniel
Caldwell, Curtis
Alasti, Hamideh
Soliman, Hany
Ung, Yee
Lee, Justin
Sun, Alexander
author_facet Markel, Daniel
Caldwell, Curtis
Alasti, Hamideh
Soliman, Hany
Ung, Yee
Lee, Justin
Sun, Alexander
author_sort Markel, Daniel
collection PubMed
description Target definition is the largest source of geometric uncertainty in radiation therapy. This is partly due to a lack of contrast between tumor and healthy soft tissue for computed tomography (CT) and due to blurriness, lower spatial resolution, and lack of a truly quantitative unit for positron emission tomography (PET). First-, second-, and higher-order statistics, Tamura, and structural features were characterized for PET and CT images of lung carcinoma and organs of the thorax. A combined decision tree (DT) with K-nearest neighbours (KNN) classifiers as nodes containing combinations of 3 features were trained and used for segmentation of the gross tumor volume. This approach was validated for 31 patients from two separate institutions and scanners. The results were compared with thresholding approaches, the fuzzy clustering method, the 3-level fuzzy locally adaptive Bayesian algorithm, the multivalued level set algorithm, and a single KNN using Hounsfield units and standard uptake value. The results showed the DTKNN classifier had the highest sensitivity of 73.9%, second highest average Dice coefficient of 0.607, and a specificity of 99.2% for classifying voxels when using a probabilistic ground truth provided by simultaneous truth and performance level estimation using contours drawn by 3 trained physicians.
format Online
Article
Text
id pubmed-3600349
institution National Center for Biotechnology Information
language English
publishDate 2013
publisher Hindawi Publishing Corporation
record_format MEDLINE/PubMed
spelling pubmed-36003492013-03-26 Automatic Segmentation of Lung Carcinoma Using 3D Texture Features in 18-FDG PET/CT Markel, Daniel Caldwell, Curtis Alasti, Hamideh Soliman, Hany Ung, Yee Lee, Justin Sun, Alexander Int J Mol Imaging Clinical Study Target definition is the largest source of geometric uncertainty in radiation therapy. This is partly due to a lack of contrast between tumor and healthy soft tissue for computed tomography (CT) and due to blurriness, lower spatial resolution, and lack of a truly quantitative unit for positron emission tomography (PET). First-, second-, and higher-order statistics, Tamura, and structural features were characterized for PET and CT images of lung carcinoma and organs of the thorax. A combined decision tree (DT) with K-nearest neighbours (KNN) classifiers as nodes containing combinations of 3 features were trained and used for segmentation of the gross tumor volume. This approach was validated for 31 patients from two separate institutions and scanners. The results were compared with thresholding approaches, the fuzzy clustering method, the 3-level fuzzy locally adaptive Bayesian algorithm, the multivalued level set algorithm, and a single KNN using Hounsfield units and standard uptake value. The results showed the DTKNN classifier had the highest sensitivity of 73.9%, second highest average Dice coefficient of 0.607, and a specificity of 99.2% for classifying voxels when using a probabilistic ground truth provided by simultaneous truth and performance level estimation using contours drawn by 3 trained physicians. Hindawi Publishing Corporation 2013 2013-02-26 /pmc/articles/PMC3600349/ /pubmed/23533750 http://dx.doi.org/10.1155/2013/980769 Text en Copyright © 2013 Daniel Markel et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Clinical Study
Markel, Daniel
Caldwell, Curtis
Alasti, Hamideh
Soliman, Hany
Ung, Yee
Lee, Justin
Sun, Alexander
Automatic Segmentation of Lung Carcinoma Using 3D Texture Features in 18-FDG PET/CT
title Automatic Segmentation of Lung Carcinoma Using 3D Texture Features in 18-FDG PET/CT
title_full Automatic Segmentation of Lung Carcinoma Using 3D Texture Features in 18-FDG PET/CT
title_fullStr Automatic Segmentation of Lung Carcinoma Using 3D Texture Features in 18-FDG PET/CT
title_full_unstemmed Automatic Segmentation of Lung Carcinoma Using 3D Texture Features in 18-FDG PET/CT
title_short Automatic Segmentation of Lung Carcinoma Using 3D Texture Features in 18-FDG PET/CT
title_sort automatic segmentation of lung carcinoma using 3d texture features in 18-fdg pet/ct
topic Clinical Study
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3600349/
https://www.ncbi.nlm.nih.gov/pubmed/23533750
http://dx.doi.org/10.1155/2013/980769
work_keys_str_mv AT markeldaniel automaticsegmentationoflungcarcinomausing3dtexturefeaturesin18fdgpetct
AT caldwellcurtis automaticsegmentationoflungcarcinomausing3dtexturefeaturesin18fdgpetct
AT alastihamideh automaticsegmentationoflungcarcinomausing3dtexturefeaturesin18fdgpetct
AT solimanhany automaticsegmentationoflungcarcinomausing3dtexturefeaturesin18fdgpetct
AT ungyee automaticsegmentationoflungcarcinomausing3dtexturefeaturesin18fdgpetct
AT leejustin automaticsegmentationoflungcarcinomausing3dtexturefeaturesin18fdgpetct
AT sunalexander automaticsegmentationoflungcarcinomausing3dtexturefeaturesin18fdgpetct