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Identification of potential targets in Staphylococcus aureus N315 using computer aided protein data analysis
Staphylococcus aureus is a gram positive bacterium, responsible for both community-acquired and hospital-acquired infection, resulting in a mortality rate of 39%. 43.2% resistance to methicilin and emerging resistance to Fluroquinolone and Oxazolidinone, have evoked the necessity of the establishmen...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Biomedical Informatics
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3602888/ https://www.ncbi.nlm.nih.gov/pubmed/23519164 http://dx.doi.org/10.6026/97320630009187 |
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author | Hossain, Mehjabeen Chowdhury, Dil Umme Salma Farhana, Jacy Akbar, Mohammed Touaha Chakraborty, Ananya Islam, Shamima Mannan, Adnan |
author_facet | Hossain, Mehjabeen Chowdhury, Dil Umme Salma Farhana, Jacy Akbar, Mohammed Touaha Chakraborty, Ananya Islam, Shamima Mannan, Adnan |
author_sort | Hossain, Mehjabeen |
collection | PubMed |
description | Staphylococcus aureus is a gram positive bacterium, responsible for both community-acquired and hospital-acquired infection, resulting in a mortality rate of 39%. 43.2% resistance to methicilin and emerging resistance to Fluroquinolone and Oxazolidinone, have evoked the necessity of the establishment of alternative and effective therapeutic approach to treat this bacteria. In this computational study, various database and online software are used to determine some specific targets of Staphylococcus aureus N315 other than those used by Penicillin, Quinolone and Oxazolidinone. For this purpose, among 302 essential proteins, 101 nonhomologous proteins were accrued and 64 proteins which are unique in several metabolic pathways of S. aureus were isolated by using metabolic pathway analysis tools. Furthermore, 7 essentially unique enzymes involved in exclusive metabolic pathways were revealed by this research, which can be potential drug target. Along with these important enzymes, 15 non-homologous proteins located on membrane were identified, which can play a vital role as potential therapeutic targets for the future researchers. |
format | Online Article Text |
id | pubmed-3602888 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Biomedical Informatics |
record_format | MEDLINE/PubMed |
spelling | pubmed-36028882013-03-21 Identification of potential targets in Staphylococcus aureus N315 using computer aided protein data analysis Hossain, Mehjabeen Chowdhury, Dil Umme Salma Farhana, Jacy Akbar, Mohammed Touaha Chakraborty, Ananya Islam, Shamima Mannan, Adnan Bioinformation Hypothesis Staphylococcus aureus is a gram positive bacterium, responsible for both community-acquired and hospital-acquired infection, resulting in a mortality rate of 39%. 43.2% resistance to methicilin and emerging resistance to Fluroquinolone and Oxazolidinone, have evoked the necessity of the establishment of alternative and effective therapeutic approach to treat this bacteria. In this computational study, various database and online software are used to determine some specific targets of Staphylococcus aureus N315 other than those used by Penicillin, Quinolone and Oxazolidinone. For this purpose, among 302 essential proteins, 101 nonhomologous proteins were accrued and 64 proteins which are unique in several metabolic pathways of S. aureus were isolated by using metabolic pathway analysis tools. Furthermore, 7 essentially unique enzymes involved in exclusive metabolic pathways were revealed by this research, which can be potential drug target. Along with these important enzymes, 15 non-homologous proteins located on membrane were identified, which can play a vital role as potential therapeutic targets for the future researchers. Biomedical Informatics 2013-02-21 /pmc/articles/PMC3602888/ /pubmed/23519164 http://dx.doi.org/10.6026/97320630009187 Text en © 2013 Biomedical Informatics This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited. |
spellingShingle | Hypothesis Hossain, Mehjabeen Chowdhury, Dil Umme Salma Farhana, Jacy Akbar, Mohammed Touaha Chakraborty, Ananya Islam, Shamima Mannan, Adnan Identification of potential targets in Staphylococcus aureus N315 using computer aided protein data analysis |
title | Identification of potential targets in Staphylococcus aureus N315 using computer aided protein data analysis |
title_full | Identification of potential targets in Staphylococcus aureus N315 using computer aided protein data analysis |
title_fullStr | Identification of potential targets in Staphylococcus aureus N315 using computer aided protein data analysis |
title_full_unstemmed | Identification of potential targets in Staphylococcus aureus N315 using computer aided protein data analysis |
title_short | Identification of potential targets in Staphylococcus aureus N315 using computer aided protein data analysis |
title_sort | identification of potential targets in staphylococcus aureus n315 using computer aided protein data analysis |
topic | Hypothesis |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3602888/ https://www.ncbi.nlm.nih.gov/pubmed/23519164 http://dx.doi.org/10.6026/97320630009187 |
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