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Identification of potential targets in Staphylococcus aureus N315 using computer aided protein data analysis

Staphylococcus aureus is a gram positive bacterium, responsible for both community-acquired and hospital-acquired infection, resulting in a mortality rate of 39%. 43.2% resistance to methicilin and emerging resistance to Fluroquinolone and Oxazolidinone, have evoked the necessity of the establishmen...

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Autores principales: Hossain, Mehjabeen, Chowdhury, Dil Umme Salma, Farhana, Jacy, Akbar, Mohammed Touaha, Chakraborty, Ananya, Islam, Shamima, Mannan, Adnan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Biomedical Informatics 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3602888/
https://www.ncbi.nlm.nih.gov/pubmed/23519164
http://dx.doi.org/10.6026/97320630009187
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author Hossain, Mehjabeen
Chowdhury, Dil Umme Salma
Farhana, Jacy
Akbar, Mohammed Touaha
Chakraborty, Ananya
Islam, Shamima
Mannan, Adnan
author_facet Hossain, Mehjabeen
Chowdhury, Dil Umme Salma
Farhana, Jacy
Akbar, Mohammed Touaha
Chakraborty, Ananya
Islam, Shamima
Mannan, Adnan
author_sort Hossain, Mehjabeen
collection PubMed
description Staphylococcus aureus is a gram positive bacterium, responsible for both community-acquired and hospital-acquired infection, resulting in a mortality rate of 39%. 43.2% resistance to methicilin and emerging resistance to Fluroquinolone and Oxazolidinone, have evoked the necessity of the establishment of alternative and effective therapeutic approach to treat this bacteria. In this computational study, various database and online software are used to determine some specific targets of Staphylococcus aureus N315 other than those used by Penicillin, Quinolone and Oxazolidinone. For this purpose, among 302 essential proteins, 101 nonhomologous proteins were accrued and 64 proteins which are unique in several metabolic pathways of S. aureus were isolated by using metabolic pathway analysis tools. Furthermore, 7 essentially unique enzymes involved in exclusive metabolic pathways were revealed by this research, which can be potential drug target. Along with these important enzymes, 15 non-homologous proteins located on membrane were identified, which can play a vital role as potential therapeutic targets for the future researchers.
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spelling pubmed-36028882013-03-21 Identification of potential targets in Staphylococcus aureus N315 using computer aided protein data analysis Hossain, Mehjabeen Chowdhury, Dil Umme Salma Farhana, Jacy Akbar, Mohammed Touaha Chakraborty, Ananya Islam, Shamima Mannan, Adnan Bioinformation Hypothesis Staphylococcus aureus is a gram positive bacterium, responsible for both community-acquired and hospital-acquired infection, resulting in a mortality rate of 39%. 43.2% resistance to methicilin and emerging resistance to Fluroquinolone and Oxazolidinone, have evoked the necessity of the establishment of alternative and effective therapeutic approach to treat this bacteria. In this computational study, various database and online software are used to determine some specific targets of Staphylococcus aureus N315 other than those used by Penicillin, Quinolone and Oxazolidinone. For this purpose, among 302 essential proteins, 101 nonhomologous proteins were accrued and 64 proteins which are unique in several metabolic pathways of S. aureus were isolated by using metabolic pathway analysis tools. Furthermore, 7 essentially unique enzymes involved in exclusive metabolic pathways were revealed by this research, which can be potential drug target. Along with these important enzymes, 15 non-homologous proteins located on membrane were identified, which can play a vital role as potential therapeutic targets for the future researchers. Biomedical Informatics 2013-02-21 /pmc/articles/PMC3602888/ /pubmed/23519164 http://dx.doi.org/10.6026/97320630009187 Text en © 2013 Biomedical Informatics This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.
spellingShingle Hypothesis
Hossain, Mehjabeen
Chowdhury, Dil Umme Salma
Farhana, Jacy
Akbar, Mohammed Touaha
Chakraborty, Ananya
Islam, Shamima
Mannan, Adnan
Identification of potential targets in Staphylococcus aureus N315 using computer aided protein data analysis
title Identification of potential targets in Staphylococcus aureus N315 using computer aided protein data analysis
title_full Identification of potential targets in Staphylococcus aureus N315 using computer aided protein data analysis
title_fullStr Identification of potential targets in Staphylococcus aureus N315 using computer aided protein data analysis
title_full_unstemmed Identification of potential targets in Staphylococcus aureus N315 using computer aided protein data analysis
title_short Identification of potential targets in Staphylococcus aureus N315 using computer aided protein data analysis
title_sort identification of potential targets in staphylococcus aureus n315 using computer aided protein data analysis
topic Hypothesis
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3602888/
https://www.ncbi.nlm.nih.gov/pubmed/23519164
http://dx.doi.org/10.6026/97320630009187
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