Cargando…
Motif analysis in DNAse hypersensitivity regions uncovers distal cis elements associated with gene expression
Reliable identification of cis regulatory elements influencing transcription remains a challenging problem in molecular bioinformatics. This is especially true for enhancer elements which are often located hundreds of kilobases from the gene promoter. High resolution DNase hypersensitivity and conne...
Autores principales: | Ziemann, Mark, Kaspi, Antony, Lazarus, Ross, El-Osta, Assam |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Biomedical Informatics
2013
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3602893/ https://www.ncbi.nlm.nih.gov/pubmed/23519433 http://dx.doi.org/10.6026/97320630009212 |
Ejemplares similares
-
Evaluation of microRNA alignment techniques
por: Ziemann, Mark, et al.
Publicado: (2016) -
Digital expression explorer 2: a repository of uniformly processed RNA sequencing data
por: Ziemann, Mark, et al.
Publicado: (2019) -
Identifying DNase I hypersensitive sites as driver distal regulatory elements in breast cancer
por: D′Antonio, Matteo, et al.
Publicado: (2017) -
cRegions—a tool for detecting conserved cis-elements in multiple sequence alignment of diverged coding sequences
por: Puustusmaa, Mikk, et al.
Publicado: (2019) -
RNA editing affects cis‐regulatory elements and predicts adverse cancer survival
por: Wu, Yuan‐Ming, et al.
Publicado: (2021)