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Automated identification of multiple seizure-related and interictal epileptiform event types in the EEG of mice

Visual scoring of murine EEG signals is time-consuming and subject to low inter-observer reproducibility. The Racine scale for behavioral seizure severity does not provide information about interictal or sub-clinical epileptiform activity. An automated algorithm for murine EEG analysis was developed...

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Autores principales: Bergstrom, Rachel A., Choi, Jee Hyun, Manduca, Armando, Shin, Hee-Sup, Worrell, Greg A., Howe, Charles L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3604748/
https://www.ncbi.nlm.nih.gov/pubmed/23514826
http://dx.doi.org/10.1038/srep01483
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author Bergstrom, Rachel A.
Choi, Jee Hyun
Manduca, Armando
Shin, Hee-Sup
Worrell, Greg A.
Howe, Charles L.
author_facet Bergstrom, Rachel A.
Choi, Jee Hyun
Manduca, Armando
Shin, Hee-Sup
Worrell, Greg A.
Howe, Charles L.
author_sort Bergstrom, Rachel A.
collection PubMed
description Visual scoring of murine EEG signals is time-consuming and subject to low inter-observer reproducibility. The Racine scale for behavioral seizure severity does not provide information about interictal or sub-clinical epileptiform activity. An automated algorithm for murine EEG analysis was developed using total signal variation and wavelet decomposition to identify spike, seizure, and other abnormal signal types in single-channel EEG collected from kainic acid-treated mice. The algorithm was validated on multi-channel EEG collected from γ-butyrolacetone-treated mice experiencing absence seizures. The algorithm identified epileptiform activity with high fidelity compared to visual scoring, correctly classifying spikes and seizures with 99% accuracy and 91% precision. The algorithm correctly identifed a spike-wave discharge focus in an absence-type seizure recorded by 36 cortical electrodes. The algorithm provides a reliable and automated method for quantification of multiple classes of epileptiform activity within the murine EEG and is tunable to a variety of event types and seizure categories.
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spelling pubmed-36047482013-03-21 Automated identification of multiple seizure-related and interictal epileptiform event types in the EEG of mice Bergstrom, Rachel A. Choi, Jee Hyun Manduca, Armando Shin, Hee-Sup Worrell, Greg A. Howe, Charles L. Sci Rep Article Visual scoring of murine EEG signals is time-consuming and subject to low inter-observer reproducibility. The Racine scale for behavioral seizure severity does not provide information about interictal or sub-clinical epileptiform activity. An automated algorithm for murine EEG analysis was developed using total signal variation and wavelet decomposition to identify spike, seizure, and other abnormal signal types in single-channel EEG collected from kainic acid-treated mice. The algorithm was validated on multi-channel EEG collected from γ-butyrolacetone-treated mice experiencing absence seizures. The algorithm identified epileptiform activity with high fidelity compared to visual scoring, correctly classifying spikes and seizures with 99% accuracy and 91% precision. The algorithm correctly identifed a spike-wave discharge focus in an absence-type seizure recorded by 36 cortical electrodes. The algorithm provides a reliable and automated method for quantification of multiple classes of epileptiform activity within the murine EEG and is tunable to a variety of event types and seizure categories. Nature Publishing Group 2013-03-21 /pmc/articles/PMC3604748/ /pubmed/23514826 http://dx.doi.org/10.1038/srep01483 Text en Copyright © 2013, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-nd/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/3.0/
spellingShingle Article
Bergstrom, Rachel A.
Choi, Jee Hyun
Manduca, Armando
Shin, Hee-Sup
Worrell, Greg A.
Howe, Charles L.
Automated identification of multiple seizure-related and interictal epileptiform event types in the EEG of mice
title Automated identification of multiple seizure-related and interictal epileptiform event types in the EEG of mice
title_full Automated identification of multiple seizure-related and interictal epileptiform event types in the EEG of mice
title_fullStr Automated identification of multiple seizure-related and interictal epileptiform event types in the EEG of mice
title_full_unstemmed Automated identification of multiple seizure-related and interictal epileptiform event types in the EEG of mice
title_short Automated identification of multiple seizure-related and interictal epileptiform event types in the EEG of mice
title_sort automated identification of multiple seizure-related and interictal epileptiform event types in the eeg of mice
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3604748/
https://www.ncbi.nlm.nih.gov/pubmed/23514826
http://dx.doi.org/10.1038/srep01483
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